Deatailed information for gene ENSG00000266195
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00048545
- Gene Symbol: RN7SL163P
- Ensembl ID: ENSG00000266195
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Gene locus: chr21:17506452-17506728
Strand: +
- Gene type: misc_RNA
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.0226
FDR = 0.0035
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: HEK293T,ARPE-19,GM12878,H1-hESC,A-549,HFFc6,H9-hESC
- Related loop:
chr21:17375000-17400000~~chr21:17500000-17525000,
chr21:17385997-17387993~~chr21:17511653-17514907,
chr21:17386036-17388915~~chr21:17511577-17514929,
chr21:17386074-17388534~~chr21:17511356-17514781,
chr21:17400000-17425000~~chr21:17500000-17525000,
chr21:17500000-17525000~~chr21:27500000-27525000,
chr21:17511653-17514907~~chr21:17526487-17528802,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
GSE44267, ENCSR662QKG, ENCSR110JOO, Direct, GSE105028, 4DNFI5SUHCGZ, ENCSR981FNA, ENCSR587DSF
- Cohesin-loop subunit: Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .