Deatailed information for gene ENSG00000156284
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00009962
- Gene Symbol: CLDN8
- Ensembl ID: ENSG00000156284
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Gene locus: chr21:30214005-30216097
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.0471
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.853
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: iPSC,NPC-H9,HT-1197,HFFc6,K1,LNCaP
- Related loop:
chr21:27500000-27525000~~chr21:30200000-30225000,
chr21:29925000-29950000~~chr21:30200000-30225000,
chr21:30208954-30210477~~chr21:30257090-30259197,
chr21:30208982-30210528~~chr21:30257106-30259191,
chr21:30208984-30210508~~chr21:30257092-30259179,
chr21:30209042-30210435~~chr21:30257097-30258737,
chr21:30215629-30216899~~chr21:30227096-30228600,
- Cohesin-loop type: HiC,Direct,ChIAPET
- Cohesin-loop study:
ENCSR247RGI, ENCSR113OIR, Direct, ENCSR314HAC, 4DNFIFLJLIS5, ENCSR386KHY, 4DNFI5SUHCGZ, 4DNFIVSCH2CH
- Cohesin-loop subunit: Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .