Deatailed information for gene ENSG00000156299
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00009964
- Gene Symbol: TIAM1
- Ensembl ID: ENSG00000156299
-
Gene locus: chr21:31118415-31558977
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction,DEGs
- Regulatory cohesin (double-evidenced):
chr21-29174072-29177013,
chr21-29177913-29178352,
chr21-29180907-29186165,
chr21-29187616-29191797,
chr21-29192039-29192372,
chr21-29192661-29199386,
chr21-29277558-29277792,
chr21-29281119-29281788,
chr21-29287057-29289061,
chr21-29289505-29290651,
chr21-29293004-29294050,
chr21-29295121-29295701,
chr21-29296491-29303668,
chr21-29684505-29684809,
chr21-29688617-29688835,
chr21-29805135-29805399,
chr21-29807171-29807440,
chr21-29813103-29813288,
chr21-29817400-29817925,
chr21-29818516-29818937,
chr21-29821192-29821694,
chr21-30257534-30258308,
chr21-30371698-30372191,
chr21-30374428-30374483,
chr21-30374805-30375152,
chr21-30699450-30699656,
chr21-30825036-30825632,
chr21-30826842-30827333,
chr21-30830980-30832249,
chr21-30838194-30839861,
chr21-30843090-30843297,
chr21-30844307-30844621,
chr21-30847638-30847960,
chr21-30880985-30881504,
chr21-31078642-31079257,
chr21-31081209-31081500,
chr21-31082992-31084009,
chr21-31084776-31087917,
chr21-31088221-31089142,
chr21-31096520-31101905,
chr21-31106786-31110561,
chr21-31115256-31115414,
chr21-31116488-31118341,
chr21-31120255-31120833,
chr21-31123859-31124581,
chr21-31125565-31125905,
chr21-31132822-31133809,
chr21-31136782-31137273,
chr21-31141215-31142096,
chr21-31142431-31143315,
chr21-31143850-31144571,
chr21-31144999-31145312,
chr21-31146265-31147154,
chr21-31151663-31152151,
chr21-31155559-31155820,
chr21-31159176-31159441,
chr21-31160575-31161697,
chr21-31162086-31162400,
chr21-31162855-31163109,
chr21-31164095-31164388,
chr21-31172023-31172627,
chr21-31173153-31175305,
chr21-31175520-31176738,
chr21-31177211-31177721,
chr21-31177999-31183023,
chr21-31183657-31184957,
chr21-31185387-31185986,
chr21-31188916-31189109,
chr21-31194439-31202575,
chr21-31203109-31204027,
chr21-31212597-31212933,
chr21-31213155-31214950,
chr21-31215238-31215447,
chr21-31215856-31216097,
chr21-31216371-31217225,
chr21-31218747-31219814,
chr21-31220481-31221467,
chr21-31222011-31222540,
chr21-31225761-31225988,
chr21-31227985-31228256,
chr21-31229671-31230166,
chr21-31233545-31233977,
chr21-31235816-31236997,
chr21-31248699-31249077,
chr21-31249931-31250684,
chr21-31251638-31252437,
chr21-31256576-31256637,
chr21-31257732-31258158,
chr21-31260562-31261769,
chr21-31264477-31265037,
chr21-31265345-31265885,
chr21-31266142-31267020,
chr21-31268211-31268470,
chr21-31273209-31273990,
chr21-31274283-31275119,
chr21-31277324-31277646,
chr21-31279884-31280101,
chr21-31281565-31284764,
chr21-31284970-31285795,
chr21-31290321-31290795,
chr21-31291514-31291905,
chr21-31292441-31293180,
chr21-31293609-31296107,
chr21-31297445-31297668,
chr21-31298480-31299818,
chr21-31303769-31304039,
chr21-31308399-31308919,
chr21-31310855-31311106,
chr21-31311829-31312183,
chr21-31312660-31314109,
chr21-31315138-31315750,
chr21-31316075-31317811,
chr21-31318106-31318364,
chr21-31319500-31319766,
chr21-31320635-31321615,
chr21-31322449-31323906,
chr21-31325968-31328155,
chr21-31329285-31330125,
chr21-31334391-31335137,
chr21-31335431-31336999,
chr21-31337569-31338444,
chr21-31340818-31341327,
chr21-31342251-31342878,
chr21-31343122-31344743,
chr21-31346173-31348564,
chr21-31351023-31353142,
chr21-31353912-31355900,
chr21-31358007-31358278,
chr21-31363680-31364050,
chr21-31365404-31365716,
chr21-31366387-31367475,
chr21-31368895-31369215,
chr21-31372187-31373155,
chr21-31373970-31375053,
chr21-31380139-31380510,
chr21-31381978-31382484,
chr21-31382914-31383204,
chr21-31385756-31388309,
chr21-31390976-31391592,
chr21-31392260-31393213,
chr21-31394630-31394826,
chr21-31395133-31395525,
chr21-31396580-31397002,
chr21-31397471-31398996,
chr21-31399268-31399467,
chr21-31402495-31404851,
chr21-31409030-31410164,
chr21-31410653-31411166,
chr21-31411403-31411817,
chr21-31413807-31414086,
chr21-31416463-31417183,
chr21-31418097-31418408,
chr21-31418798-31419272,
chr21-31420748-31421037,
chr21-31421335-31422009,
chr21-31422858-31423432,
chr21-31424769-31425748,
chr21-31427100-31427474,
chr21-31429497-31430191,
chr21-31442329-31442578,
chr21-31443697-31445240,
chr21-31446580-31447006,
chr21-31447425-31448089,
chr21-31448507-31449163,
chr21-31449890-31450147,
chr21-31450824-31451331,
chr21-31451655-31451855,
chr21-31453339-31453671,
chr21-31456234-31456513,
chr21-31457163-31460889,
chr21-31463057-31463795,
chr21-31464387-31464870,
chr21-31465564-31466027,
chr21-31468335-31468940,
chr21-31469166-31471331,
chr21-31471579-31472184,
chr21-31472990-31473444,
chr21-31474527-31474859,
chr21-31476481-31476950,
chr21-31482043-31482674,
chr21-31484286-31484552,
chr21-31485601-31488082,
chr21-31489287-31489689,
chr21-31490779-31491114,
chr21-31491728-31491886,
chr21-31492179-31493117,
chr21-31493640-31493896,
chr21-31495292-31495925,
chr21-31498303-31499593,
chr21-31501580-31502477,
chr21-31504028-31504384,
chr21-31504805-31506230,
chr21-31506687-31508179,
chr21-31508568-31510430,
chr21-31511093-31511298,
chr21-31513763-31514042,
chr21-31514452-31515240,
chr21-31517621-31517976,
chr21-31518876-31519305,
chr21-31520068-31520320,
chr21-31520547-31521081,
chr21-31521721-31522259,
chr21-31523398-31523960,
chr21-31524208-31524413,
chr21-31525603-31526581,
chr21-31527262-31532342,
chr21-31532751-31533327,
chr21-31534847-31535385,
chr21-31537492-31538470,
chr21-31538834-31539637,
chr21-31540610-31541422,
chr21-31542148-31542434,
chr21-31543154-31543927,
chr21-31544344-31545497,
chr21-31546273-31546572,
chr21-31548490-31549150,
chr21-31553544-31554053,
chr21-31554393-31555120,
chr21-31555614-31556180,
chr21-31556999-31560311,
chr21-31560523-31560796,
chr21-31562801-31563218,
chr21-31564328-31564817,
chr21-31565297-31567564,
chr21-31569967-31570343,
chr21-31575600-31576533,
chr21-31577289-31583182,
chr21-31583647-31584713,
chr21-31586933-31587272,
chr21-31588397-31588660,
chr21-31590766-31591474,
chr21-31592529-31593423,
chr21-31596869-31598169,
chr21-31598709-31599354,
chr21-31601897-31607562,
chr21-31608168-31608479,
chr21-31609099-31609509,
chr21-31610141-31611349,
chr21-31612718-31614026,
chr21-31619746-31619986,
chr21-31620281-31621249,
chr21-31621827-31622105,
chr21-31623474-31624174,
chr21-31624761-31625676,
chr21-31705596-31706060,
chr21-31706429-31706648,
chr21-31707652-31707856,
chr21-31708059-31708349,
chr21-31710228-31711264,
chr21-31711898-31712847,
chr21-31713383-31713742,
chr21-31714124-31714482,
chr21-31716096-31716505,
chr21-31717839-31718283,
chr21-31719496-31719724,
chr21-31720387-31721045,
chr21-31722659-31722899,
chr21-31725854-31726651,
chr21-31727461-31727835,
chr21-31728911-31729266,
chr21-31729532-31733952,
chr21-31734532-31735896,
chr21-31737021-31738863,
chr21-31739215-31739559,
chr21-31744136-31744783,
chr21-31745048-31745345,
chr21-31749551-31751240,
chr21-31851015-31851259,
chr21-31851947-31852172,
chr21-31855210-31855593,
chr21-31857356-31857673,
chr21-31862100-31862414,
chr21-31863205-31863716,
chr21-31864316-31868880,
chr21-31869101-31869249,
chr21-31870626-31876394,
chr21-31949860-31950518,
chr21-31954932-31955194,
chr21-31968074-31968890,
chr21-31970770-31971371,
chr21-31973554-31973655,
chr21-31974576-31974810,
chr21-32075068-32075437,
chr21-32076251-32077638,
chr21-32080346-32080864,
chr21-32082220-32082966,
chr21-32083237-32083710,
chr21-32084044-32084525,
chr21-32088574-32088818,
chr21-32092232-32092466,
chr21-32093737-32094360,
chr21-32095485-32097938,
chr21-32098632-32099431,
chr21-32099703-32101172,
chr21-32125160-32125523,
chr21-32130093-32130325,
chr21-32131131-32131601,
chr21-32132045-32132447,
chr21-32133382-32134068,
chr21-32134466-32136596,
chr21-32137895-32138483,
chr21-32140072-32141469,
chr21-32143117-32144304,
chr21-32224707-32226197,
chr21-32232980-32234166,
chr21-32236079-32236414,
chr21-32240295-32240566,
chr21-32241163-32242272,
chr21-32245181-32245400,
chr21-32245946-32246422,
chr21-32246714-32246907,
chr21-32247235-32248068,
chr21-32248296-32250173,
chr21-32250431-32250902,
chr21-32252193-32252346,
chr21-32252822-32254394,
chr21-32255209-32255948,
chr21-32256207-32261140,
chr21-32263244-32263640,
chr21-32264631-32265932,
chr21-32266164-32267358,
chr21-32276135-32276434,
chr21-32277427-32280137,
chr21-32283338-32283575,
chr21-32283821-32284221,
chr21-32284918-32285277,
chr21-32287224-32287305,
chr21-32294066-32294397,
chr21-32295053-32296161,
chr21-32298101-32299158,
chr21-32299751-32300868,
chr21-32473670-32479773,
chr21-32480464-32480858,
chr21-32482032-32482291,
chr21-32482533-32483360,
chr21-32483950-32485031,
chr21-32485253-32485688,
chr21-32486141-32486482,
chr21-32491080-32492695,
chr21-32492896-32494129,
chr21-32494469-32496274,
chr21-32498609-32500453,
chr21-32574949-32576472,
chr21-32576694-32579657,
chr21-32580005-32580573,
chr21-32580904-32582331,
chr21-32583026-32584806,
chr21-32585090-32585613,
chr21-32586300-32587559,
chr21-32590405-32590668,
chr21-32590870-32591197,
chr21-32592176-32593983,
chr21-32594251-32594977,
chr21-32595506-32596052,
chr21-32596424-32597923,
chr21-32598775-32602954,
chr21-32802706-32803538,
chr21-32803790-32803983,
chr21-32807381-32809281,
chr21-32810267-32810567,
chr21-32813428-32813843,
chr21-32818375-32819306,
chr21-32819649-32820186,
chr21-32821902-32822259,
chr21-32822753-32823042,
chr21-32824831-32828372,
-
Co-expression with cohesin genes Rho = 0.2011
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.733
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.900
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: H9-endodermal,IMR-90,MCF-10A,TAMR-MCF7,MB157,DU145,Keratinocytes192627,GM12892,K1,hTERT-HME1,H1-Mesenchymal,H1-Mesendoderm,Olfactory,Hepatocyte-H9,GM19239,HEK293T,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,MSiPS,K-562,Naive-hESC,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,LNCaP,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,Primed-hESC,NCI-H1437,iPSC,Liver,ARPE-19,HCT-116,Germinal-Center-B,OCI-AML-3,Hep-G2,REC-1,HT-1197,Kelly,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,NaiveB,U-937,HUES64,SU-DHL-4,H1-NPC,HUVEC,HL-60,NPC-H9,CyT49-endoderm,RT-112,Skin-Fibroblast,KBM-7,Jurkat,CyT49-Gut,CC-2551,HAP1,HFF-hTERT,MCF7-FASR
- Related loop:
chr21:27500000-27525000~~chr21:31450000-31475000,
chr21:27500000-27525000~~chr21:31500000-31525000,
chr21:29075000-29100000~~chr21:31175000-31200000,
chr21:29175000-29200000~~chr21:31250000-31275000,
chr21:29275000-29300000~~chr21:31150000-31175000,
chr21:29675000-29700000~~chr21:31250000-31275000,
chr21:29800000-29825000~~chr21:31250000-31275000,
chr21:30257134-30259115~~chr21:31179827-31181941,
chr21:30350000-30375000~~chr21:31375000-31400000,
chr21:30675000-30700000~~chr21:31150000-31175000,
chr21:30675000-30700000~~chr21:31250000-31275000,
chr21:30825000-30850000~~chr21:31250000-31275000,
chr21:30875000-30900000~~chr21:31250000-31275000,
chr21:30875000-30900000~~chr21:31375000-31400000,
chr21:31000000-31025000~~chr21:31150000-31175000,
chr21:31075000-31100000~~chr21:31175000-31200000,
chr21:31075000-31100000~~chr21:31325000-31350000,
chr21:31075000-31100000~~chr21:31375000-31400000,
chr21:31075000-31100000~~chr21:31450000-31475000,
chr21:31097524-31100200~~chr21:31142192-31143682,
chr21:31097524-31100200~~chr21:31179837-31181523,
chr21:31097635-31100206~~chr21:31179733-31181943,
chr21:31097651-31099664~~chr21:31180070-31181408,
chr21:31097659-31100122~~chr21:31142126-31143686,
chr21:31097659-31100122~~chr21:31179749-31181978,
chr21:31097665-31099883~~chr21:31179820-31181485,
chr21:31097675-31100213~~chr21:31179786-31181766,
chr21:31097685-31100223~~chr21:31179725-31181960,
chr21:31097698-31099915~~chr21:31179762-31181496,
chr21:31097825-31099965~~chr21:31179895-31181473,
chr21:31097828-31099837~~chr21:31179837-31181676,
chr21:31097834-31100105~~chr21:31142031-31143645,
chr21:31097834-31100105~~chr21:31179767-31181764,
chr21:31097840-31099913~~chr21:31179591-31181602,
chr21:31097840-31099933~~chr21:31142156-31143409,
chr21:31097840-31099933~~chr21:31179984-31181987,
chr21:31097840-31099938~~chr21:31179884-31181375,
chr21:31097847-31099741~~chr21:31179752-31181752,
chr21:31097852-31099834~~chr21:31179993-31181603,
chr21:31097853-31099955~~chr21:31179971-31181817,
chr21:31097866-31100218~~chr21:31179704-31181750,
chr21:31097877-31099898~~chr21:31179824-31181444,
chr21:31097883-31100039~~chr21:31179697-31181922,
chr21:31097887-31099829~~chr21:31179855-31181435,
chr21:31097887-31099865~~chr21:31179702-31181755,
chr21:31097887-31099870~~chr21:31179832-31181897,
chr21:31097892-31099900~~chr21:31179769-31181792,
chr21:31097893-31100303~~chr21:31179706-31181949,
chr21:31097896-31099782~~chr21:31142212-31143628,
chr21:31097896-31099782~~chr21:31179835-31181470,
chr21:31097906-31099678~~chr21:31180055-31181588,
chr21:31097906-31100239~~chr21:31179824-31181763,
chr21:31097923-31099913~~chr21:31179767-31181689,
chr21:31097941-31100177~~chr21:31179879-31181642,
chr21:31097943-31100132~~chr21:31179993-31181674,
chr21:31097962-31099613~~chr21:31180019-31181392,
chr21:31097968-31099503~~chr21:31179934-31181426,
chr21:31097976-31099983~~chr21:31179818-31181407,
chr21:31097982-31099419~~chr21:31179870-31181422,
chr21:31097986-31099396~~chr21:31180102-31181374,
chr21:31098023-31099887~~chr21:31180055-31181418,
chr21:31100000-31125000~~chr21:31575000-31600000,
chr21:31100000-31125000~~chr21:31600000-31625000,
chr21:31100000-31125000~~chr21:32250000-32275000,
chr21:31100000-31125000~~chr21:32800000-32825000,
chr21:31108228-31109954~~chr21:31141372-31143715,
chr21:31108228-31109954~~chr21:31179697-31181922,
chr21:31108237-31110143~~chr21:31179749-31181978,
chr21:31108247-31110001~~chr21:31142031-31143645,
chr21:31108247-31110001~~chr21:31179767-31181764,
chr21:31108253-31109958~~chr21:31179725-31181960,
chr21:31108253-31109964~~chr21:31179752-31181752,
chr21:31108255-31109956~~chr21:31179733-31181943,
chr21:31108264-31109975~~chr21:31142192-31143682,
chr21:31108353-31109891~~chr21:31179855-31181435,
chr21:31108511-31109905~~chr21:31179984-31181987,
chr21:31125000-31150000~~chr21:31250000-31275000,
chr21:31125000-31150000~~chr21:31575000-31600000,
chr21:31125000-31150000~~chr21:32275000-32300000,
chr21:31150000-31175000~~chr21:31250000-31275000,
chr21:31150000-31175000~~chr21:31375000-31400000,
chr21:31150000-31175000~~chr21:31575000-31600000,
chr21:31150000-31175000~~chr21:32250000-32275000,
chr21:31175000-31200000~~chr21:31325000-31350000,
chr21:31175000-31200000~~chr21:31400000-31425000,
chr21:31175000-31200000~~chr21:31450000-31475000,
chr21:31175000-31200000~~chr21:31500000-31525000,
chr21:31175000-31200000~~chr21:31550000-31575000,
chr21:31175000-31200000~~chr21:31575000-31600000,
chr21:31175000-31200000~~chr21:31600000-31625000,
chr21:31175000-31200000~~chr21:32250000-32275000,
chr21:31175000-31200000~~chr21:32575000-32600000,
chr21:31179704-31181750~~chr21:31603484-31605864,
chr21:31179749-31181978~~chr21:31579669-31582192,
chr21:31179749-31181978~~chr21:31603531-31606025,
chr21:31179770-31181885~~chr21:31603563-31605907,
chr21:31179837-31181523~~chr21:31580135-31582040,
chr21:31179884-31181375~~chr21:31579988-31582000,
chr21:31197237-31199506~~chr21:31603761-31605998,
chr21:31197303-31199956~~chr21:31579716-31582232,
chr21:31197303-31199956~~chr21:31603460-31605984,
chr21:31197589-31199959~~chr21:31565573-31567413,
chr21:31197589-31199959~~chr21:31579694-31582345,
chr21:31197589-31199959~~chr21:31603435-31606015,
chr21:31197601-31199886~~chr21:31579888-31581990,
chr21:31197601-31199886~~chr21:31603659-31605983,
chr21:31197619-31199531~~chr21:31579897-31582091,
chr21:31197619-31199531~~chr21:31603560-31606026,
chr21:31197637-31199884~~chr21:31579948-31582262,
chr21:31197637-31199884~~chr21:31603484-31605864,
chr21:31197648-31199955~~chr21:31457221-31458650,
chr21:31197648-31199955~~chr21:31579675-31582027,
chr21:31197648-31199955~~chr21:31603571-31605761,
chr21:31197650-31199906~~chr21:31579603-31582110,
chr21:31197650-31199906~~chr21:31603651-31605924,
chr21:31197654-31199860~~chr21:31579713-31581888,
chr21:31197654-31199860~~chr21:31603573-31605798,
chr21:31197655-31199851~~chr21:31476181-31477425,
chr21:31197655-31199851~~chr21:31579669-31582192,
chr21:31197655-31199851~~chr21:31603531-31606025,
chr21:31197672-31199795~~chr21:31579942-31582140,
chr21:31197672-31199906~~chr21:31579887-31581827,
chr21:31197672-31199906~~chr21:31603773-31605883,
chr21:31197678-31199846~~chr21:31579933-31582098,
chr21:31197678-31199846~~chr21:31603607-31605876,
chr21:31197682-31199946~~chr21:31579685-31582206,
chr21:31197682-31199946~~chr21:31603563-31605907,
chr21:31197714-31199904~~chr21:31579465-31582225,
chr21:31197714-31199904~~chr21:31603602-31605948,
chr21:31197715-31199809~~chr21:31580194-31582043,
chr21:31197715-31199809~~chr21:31603496-31605683,
chr21:31197719-31199532~~chr21:31579927-31581928,
chr21:31197719-31199532~~chr21:31603914-31605899,
chr21:31197719-31199951~~chr21:31580078-31581831,
chr21:31197724-31199535~~chr21:31476150-31477302,
chr21:31197724-31199535~~chr21:31579971-31581879,
chr21:31197724-31199535~~chr21:31603800-31605717,
chr21:31197728-31199477~~chr21:31579906-31582229,
chr21:31197729-31199566~~chr21:31603591-31605976,
chr21:31197736-31199514~~chr21:31580303-31582255,
chr21:31197736-31199514~~chr21:31603767-31606045,
chr21:31197737-31199840~~chr21:31579969-31582067,
chr21:31197737-31199840~~chr21:31603478-31605998,
chr21:31197748-31199515~~chr21:31343168-31345036,
chr21:31197748-31199515~~chr21:31508678-31510577,
chr21:31197748-31199515~~chr21:31565524-31567074,
chr21:31197748-31199515~~chr21:31579866-31581909,
chr21:31197748-31199515~~chr21:31603808-31605732,
chr21:31197752-31199500~~chr21:31579982-31582002,
chr21:31197752-31199500~~chr21:31603826-31605735,
chr21:31197753-31199935~~chr21:31565273-31566860,
chr21:31197753-31199935~~chr21:31579918-31582232,
chr21:31197753-31199935~~chr21:31603595-31606017,
chr21:31197755-31199442~~chr21:31580269-31582062,
chr21:31197755-31199442~~chr21:31603818-31605771,
chr21:31197756-31199452~~chr21:31603885-31605723,
chr21:31197757-31199878~~chr21:31580272-31582143,
chr21:31197757-31199878~~chr21:31603790-31605769,
chr21:31197757-31199907~~chr21:31579982-31581802,
chr21:31197757-31199907~~chr21:31603705-31605771,
chr21:31197758-31199504~~chr21:31580236-31582001,
chr21:31197763-31199891~~chr21:31579856-31582159,
chr21:31197763-31199891~~chr21:31603469-31605983,
chr21:31197765-31199962~~chr21:31580135-31582040,
chr21:31197765-31199962~~chr21:31603561-31606243,
chr21:31197767-31199871~~chr21:31580046-31581718,
chr21:31197780-31199473~~chr21:31580127-31582056,
chr21:31197780-31199473~~chr21:31603619-31605810,
chr21:31197780-31199925~~chr21:31580294-31582140,
chr21:31197780-31199925~~chr21:31603801-31605813,
chr21:31197787-31199879~~chr21:31579919-31581941,
chr21:31197787-31199879~~chr21:31603591-31605843,
chr21:31197799-31199453~~chr21:31580315-31581698,
chr21:31197801-31199880~~chr21:31580278-31581642,
chr21:31197801-31199880~~chr21:31604008-31605560,
chr21:31197807-31199502~~chr21:31580297-31581878,
chr21:31197807-31199502~~chr21:31604014-31605561,
chr21:31197808-31199851~~chr21:31580250-31582117,
chr21:31197808-31199851~~chr21:31603762-31606023,
chr21:31197818-31199455~~chr21:31603899-31605786,
chr21:31197869-31199761~~chr21:31580283-31581616,
chr21:31197883-31199835~~chr21:31580266-31581665,
chr21:31197883-31199835~~chr21:31604013-31605728,
chr21:31197888-31199879~~chr21:31580284-31581629,
chr21:31197888-31199879~~chr21:31603985-31605548,
chr21:31197890-31199733~~chr21:31580295-31581613,
chr21:31197890-31199733~~chr21:31604000-31605577,
chr21:31197901-31199794~~chr21:31580297-31581620,
chr21:31197901-31199794~~chr21:31603977-31605609,
chr21:31197910-31199531~~chr21:31603902-31605637,
chr21:31197925-31199613~~chr21:31580302-31581617,
chr21:31197925-31199613~~chr21:31604024-31605520,
chr21:31197954-31199538~~chr21:31604063-31605499,
chr21:31198011-31199951~~chr21:31579988-31582000,
chr21:31198011-31199951~~chr21:31603779-31605751,
chr21:31198078-31199477~~chr21:31603567-31605676,
chr21:31200000-31225000~~chr21:31300000-31325000,
chr21:31200000-31225000~~chr21:31325000-31350000,
chr21:31200000-31225000~~chr21:31375000-31400000,
chr21:31200000-31225000~~chr21:31400000-31425000,
chr21:31200000-31225000~~chr21:31425000-31450000,
chr21:31200000-31225000~~chr21:31450000-31475000,
chr21:31200000-31225000~~chr21:31550000-31575000,
chr21:31200000-31225000~~chr21:31575000-31600000,
chr21:31200000-31225000~~chr21:31600000-31625000,
chr21:31200000-31225000~~chr21:31850000-31875000,
chr21:31200000-31225000~~chr21:32250000-32275000,
chr21:31200000-31225000~~chr21:32800000-32825000,
chr21:31212839-31214885~~chr21:31579465-31582225,
chr21:31212839-31214885~~chr21:31603602-31605948,
chr21:31212886-31214857~~chr21:31475929-31477697,
chr21:31212886-31214857~~chr21:31579694-31582345,
chr21:31213123-31214793~~chr21:31579969-31582067,
chr21:31213183-31214841~~chr21:31603798-31605786,
chr21:31213256-31214845~~chr21:31579856-31582159,
chr21:31213256-31214845~~chr21:31603469-31605983,
chr21:31213266-31214844~~chr21:31579669-31582192,
chr21:31213366-31214803~~chr21:31579971-31581879,
chr21:31213437-31214794~~chr21:31603705-31605771,
chr21:31213444-31214691~~chr21:31603818-31605771,
chr21:31218191-31220098~~chr21:31343217-31344894,
chr21:31218191-31220098~~chr21:31579468-31582178,
chr21:31225000-31250000~~chr21:31325000-31350000,
chr21:31225000-31250000~~chr21:31575000-31600000,
chr21:31250000-31275000~~chr21:31375000-31400000,
chr21:31250000-31275000~~chr21:31400000-31425000,
chr21:31250000-31275000~~chr21:31475000-31500000,
chr21:31250000-31275000~~chr21:31500000-31525000,
chr21:31250000-31275000~~chr21:31575000-31600000,
chr21:31250000-31275000~~chr21:31600000-31625000,
chr21:31250000-31275000~~chr21:31700000-31725000,
chr21:31250000-31275000~~chr21:31725000-31750000,
chr21:31250000-31275000~~chr21:32225000-32250000,
chr21:31250000-31275000~~chr21:40150000-40175000,
chr21:31275000-31300000~~chr21:32475000-32500000,
chr21:31275000-31300000~~chr21:38250000-38275000,
chr21:31300000-31325000~~chr21:31575000-31600000,
chr21:31325000-31350000~~chr21:31425000-31450000,
chr21:31325000-31350000~~chr21:31500000-31525000,
chr21:31325000-31350000~~chr21:31550000-31575000,
chr21:31325000-31350000~~chr21:31575000-31600000,
chr21:31325000-31350000~~chr21:31600000-31625000,
chr21:31343102-31344948~~chr21:31557869-31560689,
chr21:31346686-31348373~~chr21:31565575-31566814,
chr21:31346686-31348373~~chr21:31579897-31582091,
chr21:31346702-31348424~~chr21:31579918-31582232,
chr21:31346706-31348459~~chr21:31565524-31567074,
chr21:31346706-31348459~~chr21:31579866-31581909,
chr21:31346727-31348487~~chr21:31457134-31458652,
chr21:31346790-31348380~~chr21:31604014-31605561,
chr21:31346852-31348335~~chr21:31508604-31510568,
chr21:31346859-31348357~~chr21:31514086-31515684,
chr21:31350000-31375000~~chr21:31475000-31500000,
chr21:31350000-31375000~~chr21:31500000-31525000,
chr21:31350000-31375000~~chr21:31550000-31575000,
chr21:31353810-31355703~~chr21:31365894-31367590,
chr21:31375000-31400000~~chr21:31475000-31500000,
chr21:31375000-31400000~~chr21:31500000-31525000,
chr21:31375000-31400000~~chr21:31575000-31600000,
chr21:31375000-31400000~~chr21:31700000-31725000,
chr21:31375000-31400000~~chr21:31950000-31975000,
chr21:31375000-31400000~~chr21:32075000-32100000,
chr21:31375000-31400000~~chr21:32125000-32150000,
chr21:31400000-31425000~~chr21:31575000-31600000,
chr21:31450000-31475000~~chr21:31550000-31575000,
chr21:31450000-31475000~~chr21:31575000-31600000,
chr21:31450000-31475000~~chr21:31600000-31625000,
chr21:31458665-31460618~~chr21:31579948-31582262,
chr21:31475000-31500000~~chr21:31575000-31600000,
chr21:31498536-31499888~~chr21:31579669-31582192,
chr21:31498536-31499888~~chr21:31603531-31606025,
chr21:31498552-31499739~~chr21:31580295-31581613,
chr21:31498554-31500056~~chr21:31579918-31582232,
chr21:31537075-31538694~~chr21:31579918-31582232,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
4DNFIQYQWPF5, GSE95015, GSE43070, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, ENCSR361AYD, 4DNFIDSWKFF5, GSE103148, 4DNFI7H4II2V, 4DNFIZ4F74QR, ENCSR350NJV, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, ENCSR113OIR, 4DNFI9VXTBE2, 4DNFIRKGMZRQ, GSE99541, ENCSR668RDP, 4DNFIL5K3MA1, 4DNFIS3DIH4V, GSE97394, 4DNFICEGAHRC, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, GSE112000, 4DNFIK61ILGM, GSE108869, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, ENCSR000FDB, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, ENCSR833CMG, 4DNFIBKZK63V, ENCSR033GUP, 4DNFIQWD8ZYD, 4DNFIIFBC8WN, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, GSE126792, ENCSR146FPM, 4DNFIOX3BGNE, ENCSR478BMT, GSE69643, 4DNFIBXWIH8J, 4DNFIJWBWE41, 4DNFICSTCJQZ, GSE155380, ENCSR587DSF, ENCSR452NHL, 4DNFIIMZB6Y9, GSE80820, GSE52457, 4DNFIBT4EAKN, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIXWCLD4M, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, ENCSR991JXX, 4DNFI9815EEJ, ENCSR778FXH, 4DNFI9ZWZ5BS, 4DNFI2J1ODWB, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIS5F6EBL, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIT96Z365, 4DNFIWZEN3FF, ENCSR194SRI, 4DNFIR8OU6QJ, 4DNFI6CWNUFL, 4DNFI5CGQ46V, 4DNFIE8E4ANZ, GSE120294, GSE84022, 4DNFIPV5KFMK, ENCSR672RHL, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFIMEG1QIC, ENCSR732QOH, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIFHU75I5, 4DNFIYD8LO9Z, ENCSR444BAR, ENCSR123UVP, 4DNFIL9M97T2, 4DNFIA7GB1NB, ENCSR550JLK, 4DNFI3A3VYWU, 4DNFIJ7OAIFQ, 4DNFIM2BMJ33, 4DNFIX4PJKXZ, GSE165038, 4DNFIALNLR78, 4DNFIYDBBSE3, ENCSR386KHY, ENCSR379CII, 4DNFIEJEFCAM, 4DNFIQRTP7NM, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, ENCSR255XYX, ENCSR404HWQ, 4DNFIE5TEYK7, 4DNFIJ8JKKWJ, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, GSE58752, GSE116869, 4DNFI8649RQJ, 4DNFIRZA6EV6, GSE116875, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR545YBD, 4DNFIILDWK8M, ENCSR866FWQ, 4DNFI6EIFUZI, 4DNFIBCIA62Q, 4DNFII6AN691, GSE111537, GSE131580, ENCSR381DCY, ENCSR981FNA, 4DNFIV239W4L, 4DNFIOUSETUP, ENCSR752QCX, ENCSR128RPG, 4DNFI6JJQKFJ, 4DNFI1UEG1HD, GSE101921, ENCSR228TUX, 4DNFIZF1KI43, 4DNFI8JFOAJT, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIQVMVRP6, ENCSR247RGI, ENCSR110JOO, ENCSR338WUS, 4DNFI5LCW273, 4DNFIP71EWXC, 4DNFINEQY95T, 4DNFIHN2QSMX, 4DNFII84FBKM, 4DNFIVSCH2CH
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: True
-
Involved cell types for DEG evidence: P3HR-1,K-562,MCF-10A,Kelly,HAP1,Keratinocytes
- Cohesin-DEGs, number of studies: 7
- Cohesin-DEGs, study: GSE115253,GSE83870,GSE140651,GSE154086,GSE126635,GSE131448
- Cohesin-DEGs, subunit: SMC3,SA2,CTCF,SMC1,Rad21,BORIS