Deatailed information for gene ENSG00000159267
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00010326
- Gene Symbol: HLCS
- Ensembl ID: ENSG00000159267
-
Gene locus: chr21:36750887-36990236
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction,DEGs,
- Regulatory cohesin (double-evidenced):
chr21-36125038-36126944,
chr21-36127229-36128557,
chr21-36128832-36129080,
chr21-36129740-36130699,
chr21-36132348-36133044,
chr21-36133297-36137447,
chr21-36138179-36138394,
chr21-36139440-36143477,
chr21-36143694-36144806,
chr21-36145249-36145917,
chr21-36146214-36147498,
chr21-36148387-36148829,
chr21-36149046-36149389,
chr21-36149733-36151341,
chr21-36399798-36400258,
chr21-36400631-36402974,
chr21-36403437-36403958,
chr21-36404207-36404954,
chr21-36408129-36408499,
chr21-36411169-36411609,
chr21-36412195-36412659,
chr21-36413976-36414306,
chr21-36414631-36414945,
chr21-36415497-36416503,
chr21-36417281-36424270,
chr21-36424574-36425739,
chr21-36428024-36432912,
chr21-36474757-36475796,
chr21-36476076-36480937,
chr21-36481528-36482476,
chr21-36483058-36483708,
chr21-36483929-36485032,
chr21-36486009-36487326,
chr21-36487671-36488711,
chr21-36489121-36491769,
chr21-36492034-36493309,
chr21-36493632-36494257,
chr21-36494558-36495295,
chr21-36496719-36498324,
chr21-36499698-36502459,
chr21-36502665-36508046,
chr21-36508508-36509460,
chr21-36509687-36510756,
chr21-36511314-36511916,
chr21-36512825-36514000,
chr21-36514562-36514704,
chr21-36514932-36516116,
chr21-36516886-36517136,
chr21-36518707-36520114,
chr21-36522371-36522616,
chr21-36522943-36523216,
chr21-36523577-36525374,
chr21-36575350-36575709,
chr21-36576412-36577230,
chr21-36583668-36584068,
chr21-36584895-36585487,
chr21-36585745-36586353,
chr21-36587320-36592079,
chr21-36592299-36593515,
chr21-36594289-36594685,
chr21-36597896-36598145,
chr21-36600818-36601345,
chr21-36604225-36607299,
chr21-36612683-36613591,
chr21-36615064-36615747,
chr21-36616639-36617355,
chr21-36626499-36626785,
chr21-36627115-36627703,
chr21-36628239-36628880,
chr21-36629116-36633556,
chr21-36635100-36635760,
chr21-36639730-36643030,
chr21-36643874-36644319,
chr21-36645284-36645814,
chr21-36646243-36646978,
chr21-36647229-36648099,
chr21-36649972-36650268,
chr21-36651157-36651225,
chr21-36651848-36651967,
chr21-36653618-36654003,
chr21-36654262-36654594,
chr21-36655685-36656584,
chr21-36659026-36660000,
chr21-36660688-36662628,
chr21-36662944-36663906,
chr21-36664128-36665501,
chr21-36665925-36666276,
chr21-36667005-36667797,
chr21-36668625-36669819,
chr21-36670832-36671224,
chr21-36671604-36671876,
chr21-36674474-36675018,
chr21-36679412-36679745,
chr21-36685090-36686439,
chr21-36689351-36689685,
chr21-36691769-36693953,
chr21-36694356-36695251,
chr21-36695763-36711052,
chr21-36713788-36714054,
chr21-36717947-36720220,
chr21-36722587-36724224,
chr21-36725682-36726362,
chr21-36726679-36728980,
chr21-36729274-36729976,
chr21-36730326-36734196,
chr21-36734513-36736672,
chr21-36737205-36737911,
chr21-36738247-36739054,
chr21-36739692-36739898,
chr21-36740699-36741157,
chr21-36741431-36742277,
chr21-36742878-36743515,
chr21-36744439-36745359,
chr21-36745702-36746410,
chr21-36747059-36748690,
chr21-36749881-36750694,
chr21-36751351-36751846,
chr21-36752882-36754752,
chr21-36755545-36756949,
chr21-36757280-36757952,
chr21-36758165-36759239,
chr21-36760233-36761201,
chr21-36761443-36762952,
chr21-36763239-36763428,
chr21-36764124-36765173,
chr21-36766550-36766875,
chr21-36767128-36767500,
chr21-36768405-36768856,
chr21-36769074-36769743,
chr21-36772578-36774299,
chr21-36775479-36775939,
chr21-36776469-36776746,
chr21-36777941-36778477,
chr21-36780788-36781219,
chr21-36783626-36784683,
chr21-36784984-36785378,
chr21-36786637-36787501,
chr21-36787792-36788862,
chr21-36791197-36791412,
chr21-36791966-36793037,
chr21-36799566-36800146,
chr21-36804012-36804366,
chr21-36805255-36805599,
chr21-36806802-36807079,
chr21-36808864-36809208,
chr21-36811751-36812086,
chr21-36819995-36821292,
chr21-36822130-36822410,
chr21-36823587-36823665,
chr21-36825639-36825838,
chr21-36827814-36828125,
chr21-36834392-36834822,
chr21-36835469-36835862,
chr21-36836871-36837203,
chr21-36839182-36839526,
chr21-36841480-36843004,
chr21-36845165-36845740,
chr21-36846792-36847797,
chr21-36848318-36848558,
chr21-36849359-36851035,
chr21-36852281-36852846,
chr21-36853092-36853523,
chr21-36853815-36855525,
chr21-36858096-36861901,
chr21-36863188-36863633,
chr21-36868703-36869527,
chr21-36873092-36873862,
chr21-36874166-36876283,
chr21-36879927-36880415,
chr21-36880756-36882507,
chr21-36883024-36884645,
chr21-36886095-36886543,
chr21-36888634-36889150,
chr21-36891744-36892476,
chr21-36898150-36898434,
chr21-36900452-36900638,
chr21-36902278-36903030,
chr21-36906879-36907037,
chr21-36908112-36912037,
chr21-36912728-36913168,
chr21-36913831-36916029,
chr21-36916572-36919027,
chr21-36921025-36921843,
chr21-36922598-36923152,
chr21-36924393-36924624,
chr21-36925188-36930260,
chr21-36931558-36932127,
chr21-36932869-36933269,
chr21-36933777-36933972,
chr21-36936430-36937373,
chr21-36938461-36938855,
chr21-36939198-36940146,
chr21-36940753-36941319,
chr21-36941642-36942402,
chr21-36945889-36946126,
chr21-36946840-36947402,
chr21-36947671-36947946,
chr21-36949217-36949518,
chr21-36953935-36954529,
chr21-36956521-36956982,
chr21-36957810-36958241,
chr21-36958523-36960338,
chr21-36962318-36962811,
chr21-36964520-36968171,
chr21-36969535-36969868,
chr21-36973649-36974411,
chr21-36974936-36975856,
chr21-36976322-36979183,
chr21-36980355-36981128,
chr21-36982411-36982979,
chr21-36983475-36983812,
chr21-36985242-36985787,
chr21-36986346-36986700,
chr21-36987033-36987211,
chr21-36987845-36988197,
chr21-36988629-36988824,
chr21-36989082-36991140,
chr21-36992148-36992448,
chr21-36992692-36993739,
chr21-36994195-36995191,
chr21-37004998-37009161,
chr21-37009443-37011358,
chr21-37052914-37053240,
chr21-37055442-37055918,
chr21-37057230-37057964,
chr21-37058503-37058789,
chr21-37059694-37061303,
chr21-37061566-37062938,
chr21-37063355-37065228,
chr21-37066951-37067057,
chr21-37070631-37076219,
chr21-37076784-37077014,
chr21-37078520-37078699,
chr21-37079061-37080047,
chr21-37081855-37082126,
chr21-37082890-37083573,
chr21-37084687-37084979,
chr21-37085624-37086068,
chr21-37086511-37087720,
chr21-37089506-37089981,
chr21-37091613-37091912,
chr21-37093055-37093396,
chr21-37098838-37099047,
chr21-37119296-37120160,
chr21-37200435-37201600,
chr21-37202328-37202527,
chr21-37206852-37210359,
chr21-37210849-37210969,
chr21-37215161-37218095,
chr21-37220054-37222105,
chr21-37223873-37226814,
chr21-37227026-37228299,
chr21-37230559-37233254,
chr21-37233610-37234227,
chr21-37234937-37235500,
chr21-37237790-37238115,
chr21-37238740-37239885,
chr21-37240742-37241813,
chr21-37243152-37244419,
chr21-37244628-37245530,
chr21-37248968-37249483,
chr21-37249994-37251771,
chr21-37254108-37254748,
chr21-37256946-37259141,
chr21-37259350-37259929,
chr21-37263577-37265365,
chr21-37265595-37269410,
chr21-37270551-37271438,
chr21-37271793-37272440,
chr21-37272945-37273597,
chr21-37274026-37274267,
chr21-37274761-37275372,
chr21-37351226-37351559,
chr21-37352423-37352964,
chr21-37356357-37357538,
chr21-37357896-37359418,
chr21-37361494-37361790,
chr21-37362970-37363891,
chr21-37364688-37373796,
chr21-37374041-37376667,
chr21-37474926-37475311,
chr21-37478789-37479291,
chr21-37479637-37479955,
chr21-37483561-37484153,
chr21-37485153-37485383,
chr21-37485921-37486191,
chr21-37489319-37490070,
chr21-37494670-37495794,
chr21-37496386-37498023,
chr21-37498550-37499117,
chr21-37549977-37550331,
chr21-37550790-37553366,
chr21-37554097-37555011,
chr21-37555275-37556440,
chr21-37557099-37558213,
chr21-37558729-37559099,
chr21-37560348-37560783,
chr21-37562174-37566445,
chr21-37566898-37567476,
chr21-37567984-37568218,
chr21-37568432-37568753,
chr21-37573339-37573876,
chr21-37574240-37576121,
chr21-37580656-37583729,
chr21-37625250-37626011,
chr21-37626527-37627532,
chr21-37631492-37632217,
chr21-37634872-37635580,
chr21-37636032-37637375,
chr21-37639797-37640540,
chr21-37641601-37643989,
chr21-37644571-37645342,
chr21-37646382-37647083,
chr21-37647564-37648424,
chr21-37649610-37650298,
chr21-37654485-37655372,
chr21-37655751-37657541,
chr21-37658435-37660876,
chr21-37661563-37661865,
chr21-37664785-37665141,
chr21-37665901-37666635,
chr21-37667425-37669249,
chr21-37670538-37671794,
chr21-37673084-37677389,
chr21-37848590-37851352,
chr21-37851997-37852496,
chr21-37854587-37856602,
chr21-37858133-37858424,
chr21-37862475-37863023,
chr21-37863574-37864405,
chr21-37865357-37865570,
chr21-37865868-37866779,
chr21-37868675-37872241,
chr21-37873511-37874441,
chr21-37874747-37875524,
chr21-37904870-37905118,
chr21-37909356-37909603,
chr21-37909892-37910463,
chr21-37913354-37918438,
chr21-37920197-37920610,
chr21-37920872-37921888,
chr21-38124153-38130792,
chr21-38135930-38141562,
chr21-38147929-38148377,
chr21-38348297-38360784,
chr21-38362993-38363357,
chr21-38365365-38365661,
-
Co-expression with cohesin genes Rho = 0.5882
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.240
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.874
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,DU145,Keratinocytes192627,GM12892,K1,hTERT-HME1,H1-Mesenchymal,H1-Mesendoderm,Olfactory,Hepatocyte-H9,GM19239,HEK293T,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,LNCaP,SU-DHL-2,H9-hESC,KU-19-19,NCI-H1437,REC-1,ARPE-19,HCT-116,Germinal-Center-B,OCI-AML-3,Hep-G2,HT-1197,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,U-937,BMEC,HUES64,SU-DHL-4,HUVEC,NPC-H9,RT-112,Skin-Fibroblast,Jurkat,CyT49-Gut,CC-2551,HAP1,HFF-hTERT,MCF7-FASR
- Related loop:
chr21:31725000-31750000~~chr21:36975000-37000000,
chr21:34350000-34375000~~chr21:36900000-36925000,
chr21:36125000-36150000~~chr21:36900000-36925000,
chr21:36125000-36150000~~chr21:36925000-36950000,
chr21:36400000-36425000~~chr21:36850000-36875000,
chr21:36400000-36425000~~chr21:36900000-36925000,
chr21:36400000-36425000~~chr21:36925000-36950000,
chr21:36418841-36421262~~chr21:36926465-36928856,
chr21:36419097-36421364~~chr21:36926664-36928827,
chr21:36419122-36421037~~chr21:36926683-36929117,
chr21:36419182-36421107~~chr21:36926687-36928814,
chr21:36419184-36421121~~chr21:36926717-36929094,
chr21:36419201-36421142~~chr21:36926513-36928814,
chr21:36419216-36421134~~chr21:36926710-36929115,
chr21:36419217-36421314~~chr21:36926678-36929090,
chr21:36419274-36420828~~chr21:36926717-36928685,
chr21:36419280-36421083~~chr21:36926505-36928808,
chr21:36419354-36421097~~chr21:36853698-36855512,
chr21:36419354-36421097~~chr21:36926649-36929131,
chr21:36419354-36421097~~chr21:36929169-36930348,
chr21:36419396-36420907~~chr21:36927027-36928493,
chr21:36419406-36420906~~chr21:36927009-36928504,
chr21:36419466-36420997~~chr21:36916786-36918422,
chr21:36419507-36420817~~chr21:36927023-36928663,
chr21:36421415-36423297~~chr21:36926465-36928856,
chr21:36421419-36423290~~chr21:36926513-36928814,
chr21:36421690-36423243~~chr21:36926866-36928715,
chr21:36421736-36423241~~chr21:36926885-36928641,
chr21:36429053-36431122~~chr21:36860258-36861974,
chr21:36429447-36431439~~chr21:36989316-36991217,
chr21:36475000-36500000~~chr21:36725000-36750000,
chr21:36475000-36500000~~chr21:36900000-36925000,
chr21:36475000-36500000~~chr21:36925000-36950000,
chr21:36500000-36525000~~chr21:36725000-36750000,
chr21:36500000-36525000~~chr21:36825000-36850000,
chr21:36500000-36525000~~chr21:36900000-36925000,
chr21:36500000-36525000~~chr21:36925000-36950000,
chr21:36503141-36505653~~chr21:36926664-36928827,
chr21:36503201-36505454~~chr21:36926683-36929117,
chr21:36503227-36505444~~chr21:36926436-36929179,
chr21:36503239-36505647~~chr21:36926716-36929066,
chr21:36503245-36505660~~chr21:36926711-36929324,
chr21:36503270-36505647~~chr21:36926678-36929090,
chr21:36503272-36505466~~chr21:36916749-36918779,
chr21:36503272-36505466~~chr21:36926649-36929131,
chr21:36503276-36505640~~chr21:36926695-36929067,
chr21:36503297-36505454~~chr21:36926751-36928873,
chr21:36503297-36505649~~chr21:36853680-36855572,
chr21:36503297-36505649~~chr21:36916842-36918389,
chr21:36503297-36505649~~chr21:36926717-36929094,
chr21:36503300-36505643~~chr21:36916612-36918723,
chr21:36503300-36505643~~chr21:36926687-36928814,
chr21:36503304-36505537~~chr21:36926465-36928856,
chr21:36503313-36505627~~chr21:36926505-36928808,
chr21:36503329-36505471~~chr21:36926683-36929090,
chr21:36503476-36505662~~chr21:36926726-36928770,
chr21:36503483-36505671~~chr21:36916655-36918813,
chr21:36503483-36505671~~chr21:36926706-36929092,
chr21:36503492-36505441~~chr21:36926698-36929094,
chr21:36503500-36505460~~chr21:36853738-36855617,
chr21:36503512-36505449~~chr21:36926642-36928684,
chr21:36503513-36505278~~chr21:36926493-36928737,
chr21:36503555-36505459~~chr21:36926705-36929148,
chr21:36503560-36505442~~chr21:36926670-36928671,
chr21:36503645-36505444~~chr21:36926732-36929011,
chr21:36503662-36505206~~chr21:36938871-36940246,
chr21:36503774-36505468~~chr21:36926932-36928694,
chr21:36575000-36600000~~chr21:36725000-36750000,
chr21:36575000-36600000~~chr21:36850000-36875000,
chr21:36575000-36600000~~chr21:36900000-36925000,
chr21:36584492-36585859~~chr21:36926709-36929084,
chr21:36584531-36585826~~chr21:36916655-36918813,
chr21:36584590-36585752~~chr21:36917143-36918319,
chr21:36600000-36625000~~chr21:36850000-36875000,
chr21:36625000-36650000~~chr21:36725000-36750000,
chr21:36625000-36650000~~chr21:36850000-36875000,
chr21:36625000-36650000~~chr21:36900000-36925000,
chr21:36625000-36650000~~chr21:36925000-36950000,
chr21:36629965-36632036~~chr21:36926513-36928814,
chr21:36629967-36632038~~chr21:36926717-36929094,
chr21:36629983-36632073~~chr21:36926687-36928814,
chr21:36629992-36632063~~chr21:36926698-36929094,
chr21:36629993-36632017~~chr21:36926436-36929179,
chr21:36629999-36631989~~chr21:36853631-36855655,
chr21:36629999-36631989~~chr21:36916779-36918440,
chr21:36629999-36631989~~chr21:36926695-36929067,
chr21:36629999-36631990~~chr21:36853672-36855599,
chr21:36629999-36631990~~chr21:36916781-36919095,
chr21:36630009-36632057~~chr21:36926465-36928856,
chr21:36630020-36631673~~chr21:36853741-36855359,
chr21:36630020-36631673~~chr21:36926943-36928561,
chr21:36630020-36631856~~chr21:36917076-36918400,
chr21:36630020-36631856~~chr21:36926866-36928715,
chr21:36630022-36631930~~chr21:36853698-36855512,
chr21:36630022-36631930~~chr21:36916749-36918779,
chr21:36630022-36631930~~chr21:36926649-36929131,
chr21:36630025-36631987~~chr21:36926664-36928827,
chr21:36630041-36631980~~chr21:36853648-36855688,
chr21:36630041-36631980~~chr21:36916655-36918813,
chr21:36630041-36631980~~chr21:36926706-36929092,
chr21:36630043-36632051~~chr21:36926683-36929117,
chr21:36630047-36631984~~chr21:36926713-36929121,
chr21:36630061-36631975~~chr21:36853777-36855522,
chr21:36630061-36631975~~chr21:36926705-36929148,
chr21:36630069-36631999~~chr21:36926719-36928757,
chr21:36630069-36632004~~chr21:36926505-36928808,
chr21:36630071-36632034~~chr21:36926986-36928735,
chr21:36630079-36631909~~chr21:36853738-36855617,
chr21:36630079-36631909~~chr21:36916843-36918429,
chr21:36630079-36631909~~chr21:36926924-36928703,
chr21:36630079-36631971~~chr21:36916825-36918710,
chr21:36630079-36631971~~chr21:36926751-36928873,
chr21:36630079-36632006~~chr21:36853685-36855567,
chr21:36630095-36631910~~chr21:36926753-36928677,
chr21:36630100-36631985~~chr21:36926700-36928696,
chr21:36630118-36632028~~chr21:36926726-36928770,
chr21:36630131-36631967~~chr21:36926642-36928684,
chr21:36630131-36631967~~chr21:36938670-36940602,
chr21:36630135-36631927~~chr21:36853724-36855502,
chr21:36630135-36631927~~chr21:36926709-36929084,
chr21:36630140-36632034~~chr21:36926410-36929350,
chr21:36630148-36631615~~chr21:36926948-36928575,
chr21:36630184-36631672~~chr21:36853762-36855538,
chr21:36630184-36631672~~chr21:36917051-36918370,
chr21:36630184-36631672~~chr21:36926932-36928694,
chr21:36630205-36631735~~chr21:36926885-36928641,
chr21:36630208-36631705~~chr21:36926942-36928578,
chr21:36630216-36631633~~chr21:36927027-36928493,
chr21:36630241-36631581~~chr21:36927031-36928663,
chr21:36639891-36641654~~chr21:36926687-36928814,
chr21:36640245-36641751~~chr21:36916843-36918429,
chr21:36650000-36675000~~chr21:36875000-36900000,
chr21:36650000-36675000~~chr21:36900000-36925000,
chr21:36650000-36675000~~chr21:36925000-36950000,
chr21:36661089-36662805~~chr21:36926942-36928692,
chr21:36661117-36662769~~chr21:36927009-36928504,
chr21:36661133-36662988~~chr21:36853672-36855599,
chr21:36661144-36662963~~chr21:36916775-36918452,
chr21:36661144-36662963~~chr21:36926710-36929115,
chr21:36661151-36662948~~chr21:36926649-36929131,
chr21:36661153-36662982~~chr21:36916793-36918416,
chr21:36661153-36662982~~chr21:36926713-36929121,
chr21:36661155-36662934~~chr21:36926465-36928856,
chr21:36661160-36663028~~chr21:36926687-36928814,
chr21:36661164-36662953~~chr21:36926726-36928770,
chr21:36661178-36662981~~chr21:36916765-36918736,
chr21:36661178-36662981~~chr21:36926664-36928827,
chr21:36661187-36662898~~chr21:36926505-36928808,
chr21:36661192-36662935~~chr21:36926698-36929094,
chr21:36661198-36662971~~chr21:36926727-36928820,
chr21:36661203-36662789~~chr21:36853762-36855538,
chr21:36661239-36662859~~chr21:36853733-36855333,
chr21:36661375-36662830~~chr21:36917122-36918453,
chr21:36675000-36700000~~chr21:36900000-36925000,
chr21:36675000-36700000~~chr21:36925000-36950000,
chr21:36700000-36725000~~chr21:36850000-36875000,
chr21:36700000-36725000~~chr21:36900000-36925000,
chr21:36700000-36725000~~chr21:36925000-36950000,
chr21:36725000-36750000~~chr21:36900000-36925000,
chr21:36725000-36750000~~chr21:36925000-36950000,
chr21:36725000-36750000~~chr21:37050000-37075000,
chr21:36727406-36729008~~chr21:36853567-36855599,
chr21:36746594-36748679~~chr21:36926513-36928814,
chr21:36746609-36749083~~chr21:36853704-36855509,
chr21:36746609-36749083~~chr21:36916830-36918749,
chr21:36746609-36749083~~chr21:36926698-36929094,
chr21:36746645-36749017~~chr21:36926642-36928684,
chr21:36746707-36748632~~chr21:36917076-36918400,
chr21:36746841-36748820~~chr21:36853768-36855574,
chr21:36746841-36748820~~chr21:36926678-36929090,
chr21:36746942-36748770~~chr21:36853698-36855512,
chr21:36746942-36748770~~chr21:36916749-36918779,
chr21:36746944-36749154~~chr21:36916612-36918723,
chr21:36746944-36749154~~chr21:36926687-36928814,
chr21:36746957-36749111~~chr21:36916838-36918727,
chr21:36746964-36748885~~chr21:36853704-36855614,
chr21:36746970-36748653~~chr21:36853694-36855322,
chr21:36747017-36748924~~chr21:36926717-36928685,
chr21:36747198-36748728~~chr21:36926753-36928677,
chr21:36747249-36749170~~chr21:36926465-36928856,
chr21:36747295-36748582~~chr21:36926942-36928578,
chr21:36750000-36775000~~chr21:36850000-36875000,
chr21:36750000-36775000~~chr21:36900000-36925000,
chr21:36825000-36850000~~chr21:36925000-36950000,
chr21:36925000-36950000~~chr21:38350000-38375000,
chr21:36938297-36940389~~chr21:37009089-37011147,
chr21:36938603-36940392~~chr21:37009094-37011139,
chr21:36938603-36940392~~chr21:37581749-37583648,
chr21:36938657-36940545~~chr21:36989154-36991337,
chr21:36938657-36940545~~chr21:37641615-37643952,
chr21:36938709-36940332~~chr21:37009131-37010729,
chr21:36938714-36940414~~chr21:36965300-36967660,
chr21:36938795-36940479~~chr21:37009057-37010910,
chr21:36938850-36940337~~chr21:36965489-36966668,
chr21:36938850-36940337~~chr21:37086674-37088107,
chr21:36938878-36940353~~chr21:37009171-37010708,
chr21:36950000-36975000~~chr21:37050000-37075000,
chr21:36950000-36975000~~chr21:37075000-37100000,
chr21:36950000-36975000~~chr21:37250000-37275000,
chr21:36950000-36975000~~chr21:37350000-37375000,
chr21:36950000-36975000~~chr21:37550000-37575000,
chr21:36975000-37000000~~chr21:37075000-37100000,
chr21:36975000-37000000~~chr21:37200000-37225000,
chr21:36975000-37000000~~chr21:37225000-37250000,
chr21:36975000-37000000~~chr21:37250000-37275000,
chr21:36975000-37000000~~chr21:37350000-37375000,
chr21:36975000-37000000~~chr21:37475000-37500000,
chr21:36975000-37000000~~chr21:37550000-37575000,
chr21:36975000-37000000~~chr21:37625000-37650000,
chr21:36975000-37000000~~chr21:37650000-37675000,
chr21:36975000-37000000~~chr21:37850000-37875000,
chr21:36975000-37000000~~chr21:37900000-37925000,
chr21:36975000-37000000~~chr21:38125000-38150000,
chr21:36976114-36978430~~chr21:37009040-37011094,
chr21:36976114-36978430~~chr21:37086465-37088179,
chr21:36976280-36978448~~chr21:36989013-36991518,
chr21:36976280-36978448~~chr21:37009094-37011139,
chr21:36976280-36978448~~chr21:37078697-37080394,
chr21:36976280-36978448~~chr21:37086131-37087976,
chr21:36976388-36978333~~chr21:37009080-37011137,
chr21:36976391-36978395~~chr21:36988956-36991174,
chr21:36976392-36978397~~chr21:37009089-37011147,
chr21:36976394-36978416~~chr21:37009250-37011101,
chr21:36976394-36978416~~chr21:37086094-37088173,
chr21:36976402-36978434~~chr21:37086106-37088263,
chr21:36976404-36978374~~chr21:37086393-37088124,
chr21:36976407-36978411~~chr21:37009056-37011247,
chr21:36976407-36978411~~chr21:37086055-37088195,
chr21:36976409-36978425~~chr21:37009116-37011027,
chr21:36976410-36978425~~chr21:37009307-37011128,
chr21:36976410-36978425~~chr21:37581857-37583566,
chr21:36976414-36978410~~chr21:37581771-37583697,
chr21:36976414-36978490~~chr21:37009170-37010886,
chr21:36976414-36978490~~chr21:37118786-37120541,
chr21:36976414-36978490~~chr21:37581977-37583577,
chr21:36976416-36978177~~chr21:37079107-37080371,
chr21:36976420-36977983~~chr21:37009274-37010871,
chr21:36976420-36978300~~chr21:37009165-37010905,
chr21:36976420-36978406~~chr21:36989198-36991097,
chr21:36976420-36978406~~chr21:37009183-37010907,
chr21:36976420-36978417~~chr21:37086403-37088182,
chr21:36976425-36978091~~chr21:37009147-37011170,
chr21:36976426-36978435~~chr21:37086473-37087963,
chr21:36976427-36978248~~chr21:37086150-37088199,
chr21:36976430-36978401~~chr21:37086077-37088227,
chr21:36976435-36978463~~chr21:37009096-37011260,
chr21:36976435-36978463~~chr21:37086055-37088213,
chr21:36976439-36978624~~chr21:36989354-36991335,
chr21:36976458-36978476~~chr21:36989166-36991059,
chr21:36976463-36978161~~chr21:37009171-37010708,
chr21:36976463-36978487~~chr21:37009057-37010910,
chr21:36989121-36991424~~chr21:37071179-37074846,
chr21:36989176-36991225~~chr21:37915637-37917611,
chr21:36989316-36991217~~chr21:37086306-37088100,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
GSE95015, GSE43070, 4DNFIDJ2JZ7Q, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, ENCSR361AYD, 4DNFIDSWKFF5, 4DNFIZ4F74QR, 4DNFI7H4II2V, ENCSR350NJV, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, ENCSR113OIR, 4DNFIRKGMZRQ, ENCSR668RDP, GSE97394, 4DNFICEGAHRC, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, 4DNFI8Y9SRP2, 4DNFIK61ILGM, GSE108869, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, ENCSR000FDB, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, ENCSR833CMG, ENCSR033GUP, 4DNFIQWD8ZYD, 4DNFIIFBC8WN, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, ENCSR146FPM, GSE155380, 4DNFICSTCJQZ, ENCSR587DSF, ENCSR452NHL, GSE80820, GSE52457, 4DNFIBT4EAKN, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, ENCSR991JXX, 4DNFI9815EEJ, 4DNFI9ZWZ5BS, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIWZEN3FF, ENCSR194SRI, 4DNFIR8OU6QJ, 4DNFI6CWNUFL, 4DNFIE8E4ANZ, GSE120294, GSE84022, ENCSR672RHL, 4DNFIW8TIFI5, 4DNFIMEG1QIC, ENCSR732QOH, 4DNFIF2D3TL9, 4DNFIYD8LO9Z, ENCSR444BAR, 4DNFIL9M97T2, ENCSR550JLK, 4DNFI3A3VYWU, GSE165038, 4DNFIALNLR78, ENCSR386KHY, ENCSR379CII, 4DNFIEJEFCAM, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, ENCSR255XYX, ENCSR404HWQ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, ENCSR507AHE, GSE116869, 4DNFI8649RQJ, GSE116875, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR866FWQ, 4DNFI6EIFUZI, GSE111537, ENCSR381DCY, ENCSR981FNA, 4DNFIV239W4L, 4DNFIOUSETUP, ENCSR752QCX, ENCSR128RPG, 4DNFI1UEG1HD, GSE101921, 4DNFIOCW5AEM, 4DNFIQVMVRP6, 4DNFIC3HAU11, ENCSR247RGI, ENCSR110JOO, ENCSR338WUS, 4DNFIHN2QSMX, 4DNFII84FBKM
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: True
-
Involved cell types for DEG evidence: HL-60,SLK,MCF-10A,CMK,HAP1,U2OS,HeLa-S3
- Cohesin-DEGs, number of studies: 8
- Cohesin-DEGs, study: GSE101921,GSE131581,GSE154086,GSE138937,GSE126635,GSE89799,GSE130558
- Cohesin-DEGs, subunit: WAPL,CTCF,Rad21,SA2