Deatailed information for gene ENSG00000160207
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00010439
- Gene Symbol: HSF2BP
- Ensembl ID: ENSG00000160207
-
Gene locus: chr21:43529185-43659488
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction,DEGs,
- Regulatory cohesin (double-evidenced):
chr21-41625452-41626403,
chr21-41627233-41628368,
chr21-41629667-41633608,
chr21-41634030-41636192,
chr21-41636682-41637531,
chr21-41638110-41638628,
chr21-41639388-41640365,
chr21-41640676-41643854,
chr21-41645785-41646060,
chr21-41647714-41649300,
chr21-41649662-41650037,
chr21-41925348-41930095,
chr21-41930445-41934884,
chr21-41935426-41935789,
chr21-41936840-41937153,
chr21-41939422-41940001,
chr21-41942461-41944496,
chr21-41947046-41947327,
chr21-41947715-41949276,
chr21-42103416-42126825,
chr21-42127155-42127810,
chr21-42128488-42129619,
chr21-42130648-42131154,
chr21-42133171-42133790,
chr21-42135118-42136218,
chr21-42136531-42136713,
chr21-42136966-42138370,
chr21-42139645-42142559,
chr21-42143139-42149312,
chr21-42149675-42151617,
chr21-42152798-42155831,
chr21-42156081-42158150,
chr21-42158837-42159271,
chr21-42159533-42167922,
chr21-42168175-42168574,
chr21-42169121-42169273,
chr21-42171081-42172120,
chr21-42172666-42173562,
chr21-42173962-42174405,
chr21-42422915-42428748,
chr21-42429069-42429373,
chr21-42429892-42431565,
chr21-42432008-42432290,
chr21-42433805-42434474,
chr21-42434904-42435230,
chr21-42436840-42441137,
chr21-42442018-42442307,
chr21-42443007-42454584,
chr21-42524067-42525788,
chr21-42526135-42528623,
chr21-42528891-42529866,
chr21-42530287-42531423,
chr21-42532164-42534148,
chr21-42534381-42538581,
chr21-42538854-42540670,
chr21-42540899-42541525,
chr21-42542597-42549588,
chr21-42574597-42575565,
chr21-42576721-42576991,
chr21-42578056-42578346,
chr21-42578723-42581320,
chr21-42581763-42582576,
chr21-42583402-42584657,
chr21-42586456-42597158,
chr21-42597733-42599089,
chr21-42599440-42600439,
chr21-42601201-42601742,
chr21-42607142-42608454,
chr21-42609794-42610085,
chr21-42614071-42618253,
chr21-42618578-42619171,
chr21-42619649-42620219,
chr21-42620846-42621537,
chr21-42624120-42625917,
chr21-42722042-42725763,
chr21-42730966-42735509,
chr21-42735915-42736171,
chr21-42736532-42737441,
chr21-42737823-42739971,
chr21-42741003-42741674,
chr21-42742668-42742887,
chr21-42743465-42748459,
chr21-42749267-42749616,
chr21-42749851-42750087,
chr21-42799515-42801184,
chr21-42801570-42802027,
chr21-42804198-42804619,
chr21-42806323-42807117,
chr21-42807469-42808220,
chr21-42809607-42810029,
chr21-42810534-42811625,
chr21-42812043-42812143,
chr21-42812479-42812787,
chr21-42815294-42815581,
chr21-42816699-42821466,
chr21-42847259-42856312,
chr21-42856928-42857550,
chr21-42858264-42858922,
chr21-42859132-42861293,
chr21-42861653-42864957,
chr21-42865222-42866633,
chr21-42867885-42870709,
chr21-42872006-42873778,
chr21-42875265-42875657,
chr21-42875983-42876584,
chr21-42876831-42877399,
chr21-42877653-42880442,
chr21-42881000-42881276,
chr21-42881848-42882396,
chr21-42885959-42886266,
chr21-42888778-42889585,
chr21-42890204-42894569,
chr21-42895138-42895610,
chr21-42896014-42896815,
chr21-42897274-42897953,
chr21-42898298-42898649,
chr21-42898938-42900986,
chr21-42901231-42902142,
chr21-42903879-42905128,
chr21-42905606-42906786,
chr21-42908791-42909506,
chr21-42909724-42911164,
chr21-42912357-42914258,
chr21-42914488-42914837,
chr21-42915076-42915684,
chr21-42916003-42917086,
chr21-42917709-42919392,
chr21-42919813-42921376,
chr21-42921622-42928571,
chr21-42928933-42932902,
chr21-42933507-42933865,
chr21-42936506-42943558,
chr21-42948707-42949766,
chr21-42971699-42976556,
chr21-42977567-42978245,
chr21-42978524-42979165,
chr21-42979449-42979775,
chr21-42980073-42980693,
chr21-42981060-42983699,
chr21-42984049-42984123,
chr21-42984399-42985953,
chr21-42986206-42987380,
chr21-42987592-42989052,
chr21-42989441-42990324,
chr21-42991464-42993497,
chr21-42993747-42994516,
chr21-42996864-42997865,
chr21-42998695-42999369,
chr21-43000878-43004167,
chr21-43005014-43005958,
chr21-43006547-43007242,
chr21-43007563-43008111,
chr21-43008975-43009699,
chr21-43011079-43011547,
chr21-43012278-43013148,
chr21-43016030-43017256,
chr21-43018084-43019388,
chr21-43020175-43023005,
chr21-43023655-43024103,
chr21-43024487-43026869,
chr21-43027260-43028315,
chr21-43028717-43029018,
chr21-43029424-43030648,
chr21-43031865-43032624,
chr21-43033056-43033422,
chr21-43033645-43034830,
chr21-43036478-43039973,
chr21-43040304-43041198,
chr21-43041584-43043029,
chr21-43043372-43043773,
chr21-43044579-43047606,
chr21-43049093-43049369,
chr21-43049841-43050585,
chr21-43167531-43179410,
chr21-43179782-43180289,
chr21-43180997-43181922,
chr21-43186619-43189146,
chr21-43189488-43189736,
chr21-43190641-43195980,
chr21-43196363-43198075,
chr21-43202414-43202849,
chr21-43203180-43204296,
chr21-43205526-43206063,
chr21-43206324-43207655,
chr21-43207866-43208349,
chr21-43208557-43212285,
chr21-43262337-43262934,
chr21-43263265-43265021,
chr21-43265406-43280154,
chr21-43280924-43283710,
chr21-43285633-43286421,
chr21-43287064-43289808,
chr21-43290025-43293553,
chr21-43294387-43294818,
chr21-43295496-43295735,
chr21-43296982-43309547,
chr21-43311036-43327583,
chr21-43328508-43351938,
chr21-43352261-43357227,
chr21-43357471-43370764,
chr21-43371758-43372139,
chr21-43372411-43378616,
chr21-43422309-43432234,
chr21-43432450-43433234,
chr21-43433637-43434586,
chr21-43435595-43436739,
chr21-43437460-43438217,
chr21-43439316-43439966,
chr21-43440223-43449086,
chr21-43449516-43454000,
chr21-43475556-43475956,
chr21-43476463-43479893,
chr21-43481118-43481938,
chr21-43482383-43482981,
chr21-43483708-43484092,
chr21-43484602-43485037,
chr21-43485409-43486817,
chr21-43487663-43489449,
chr21-43491632-43492250,
chr21-43492511-43495767,
chr21-43497225-43501117,
chr21-43532263-43532404,
chr21-43542853-43543513,
chr21-43549563-43550094,
chr21-43562496-43563004,
chr21-43564497-43565679,
chr21-43571896-43572804,
chr21-43573093-43574294,
chr21-43574497-43576116,
chr21-43576516-43576782,
chr21-43578473-43579527,
chr21-43581013-43581404,
chr21-43581641-43582576,
chr21-43582859-43583337,
chr21-43583553-43584232,
chr21-43584938-43588325,
chr21-43589018-43591020,
chr21-43591407-43592525,
chr21-43592960-43594483,
chr21-43595004-43602071,
chr21-43602287-43614768,
chr21-43616172-43617037,
chr21-43618660-43619178,
chr21-43619389-43620762,
chr21-43621197-43621495,
chr21-43624303-43624805,
chr21-43626450-43626836,
chr21-43627385-43627862,
chr21-43631250-43632687,
chr21-43634076-43634294,
chr21-43634658-43635007,
chr21-43635772-43636021,
chr21-43636596-43637015,
chr21-43638930-43640728,
chr21-43640994-43641471,
chr21-43642814-43643056,
chr21-43643270-43649915,
chr21-43650183-43650609,
chr21-43652784-43653261,
chr21-43653524-43654073,
chr21-43654592-43655821,
chr21-43657025-43661637,
chr21-43663113-43663746,
chr21-43714967-43730833,
chr21-43731350-43745389,
chr21-43745728-43760952,
chr21-43761154-43780032,
chr21-44320741-44336654,
chr21-44337821-44343795,
chr21-44344069-44346159,
chr21-44347920-44356379,
chr21-44474734-44475102,
chr21-44477225-44484621,
chr21-44484854-44488529,
chr21-44488757-44489043,
chr21-44489948-44491135,
chr21-44493207-44494864,
chr21-44495074-44495354,
chr21-44496153-44497242,
chr21-44498019-44500523,
chr21-44681190-44682189,
chr21-44682701-44683068,
chr21-44685043-44685853,
chr21-44686092-44689539,
chr21-44694749-44695961,
chr21-44696518-44698783,
chr21-44699438-44700075,
chr21-44770932-44775360,
chr21-44775568-44776159,
chr21-44778211-44780009,
chr21-44780867-44781685,
chr21-44784599-44786454,
chr21-44786700-44787596,
chr21-44788341-44788598,
chr21-44789666-44790323,
chr21-44791310-44795621,
chr21-44797363-44798119,
chr21-44799103-44805501,
-
Co-expression with cohesin genes Rho = 0.4790
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.720
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.849
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,Right-Ventricle,Keratinocytes192627,Aorta,K1,Spleen,H1-Mesenchymal,H1-Mesendoderm,Olfactory,GM19239,HEK293T,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,iPSC,Liver,OCI-AML-3,HCT-116,Germinal-Center-B,REC-1,Hep-G2,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,NaiveB,U-937,Bladder,BMEC,SU-DHL-4,H1-NPC,CyT49-hESC,HUVEC,HL-60,NPC-H9,CyT49-endoderm,RT-112,Left-Ventricle,KBM-7,CC-2551,CyT49-Gut,HAP1,HFF-hTERT,MCF7-FASR,Neutrophil
- Related loop:
chr21:41125000-41150000~~chr21:43600000-43625000,
chr21:41625000-41650000~~chr21:43575000-43600000,
chr21:41925000-41950000~~chr21:43575000-43600000,
chr21:42125000-42150000~~chr21:43650000-43675000,
chr21:42150000-42175000~~chr21:43625000-43650000,
chr21:42425000-42450000~~chr21:43575000-43600000,
chr21:42525000-42550000~~chr21:43575000-43600000,
chr21:42575000-42600000~~chr21:43575000-43600000,
chr21:42575000-42600000~~chr21:43600000-43625000,
chr21:42575000-42600000~~chr21:43625000-43650000,
chr21:42600000-42625000~~chr21:43625000-43650000,
chr21:42600000-42625000~~chr21:43650000-43675000,
chr21:42725000-42750000~~chr21:43575000-43600000,
chr21:42800000-42825000~~chr21:43575000-43600000,
chr21:42800000-42825000~~chr21:43625000-43650000,
chr21:42806064-42807428~~chr21:43644880-43647795,
chr21:42850000-42875000~~chr21:43650000-43675000,
chr21:42850088-42851920~~chr21:43644933-43647734,
chr21:42850353-42851585~~chr21:43645063-43647595,
chr21:42875000-42900000~~chr21:43625000-43650000,
chr21:42875000-42900000~~chr21:43650000-43675000,
chr21:42900000-42925000~~chr21:43600000-43625000,
chr21:42900000-42925000~~chr21:43625000-43650000,
chr21:42900000-42925000~~chr21:43650000-43675000,
chr21:42922609-42925287~~chr21:43644896-43647868,
chr21:42922692-42925178~~chr21:43644727-43647870,
chr21:42922930-42925162~~chr21:43644933-43647734,
chr21:42922962-42925091~~chr21:43644228-43647626,
chr21:42922972-42925217~~chr21:43644939-43647696,
chr21:42923020-42925261~~chr21:43644178-43647643,
chr21:42925000-42950000~~chr21:43575000-43600000,
chr21:42925000-42950000~~chr21:43625000-43650000,
chr21:42925000-42950000~~chr21:43650000-43675000,
chr21:42975000-43000000~~chr21:43575000-43600000,
chr21:42975000-43000000~~chr21:43650000-43675000,
chr21:43000000-43025000~~chr21:43575000-43600000,
chr21:43000000-43025000~~chr21:43600000-43625000,
chr21:43000000-43025000~~chr21:43625000-43650000,
chr21:43000000-43025000~~chr21:43650000-43675000,
chr21:43025000-43050000~~chr21:43650000-43675000,
chr21:43175000-43200000~~chr21:43575000-43600000,
chr21:43175000-43200000~~chr21:43600000-43625000,
chr21:43175000-43200000~~chr21:43625000-43650000,
chr21:43175000-43200000~~chr21:43650000-43675000,
chr21:43200000-43225000~~chr21:43575000-43600000,
chr21:43200000-43225000~~chr21:43600000-43625000,
chr21:43200000-43225000~~chr21:43625000-43650000,
chr21:43200000-43225000~~chr21:43650000-43675000,
chr21:43209337-43212050~~chr21:43644682-43647799,
chr21:43209386-43212601~~chr21:43644722-43647651,
chr21:43210267-43212835~~chr21:43644178-43647643,
chr21:43210279-43212712~~chr21:43644144-43647779,
chr21:43250000-43275000~~chr21:43575000-43600000,
chr21:43275000-43300000~~chr21:43600000-43625000,
chr21:43275000-43300000~~chr21:43625000-43650000,
chr21:43300000-43325000~~chr21:43575000-43600000,
chr21:43300000-43325000~~chr21:43600000-43625000,
chr21:43300000-43325000~~chr21:43625000-43650000,
chr21:43300000-43325000~~chr21:43650000-43675000,
chr21:43325000-43350000~~chr21:43575000-43600000,
chr21:43325000-43350000~~chr21:43600000-43625000,
chr21:43325000-43350000~~chr21:43625000-43650000,
chr21:43325000-43350000~~chr21:43650000-43675000,
chr21:43342049-43344350~~chr21:43645041-43647656,
chr21:43350000-43375000~~chr21:43575000-43600000,
chr21:43350000-43375000~~chr21:43600000-43625000,
chr21:43350000-43375000~~chr21:43625000-43650000,
chr21:43350000-43375000~~chr21:43650000-43675000,
chr21:43425000-43450000~~chr21:43625000-43650000,
chr21:43475000-43500000~~chr21:43600000-43625000,
chr21:43475000-43500000~~chr21:43625000-43650000,
chr21:43575000-43600000~~chr21:43725000-43750000,
chr21:43575000-43600000~~chr21:44325000-44350000,
chr21:43575000-43600000~~chr21:44475000-44500000,
chr21:43575000-43600000~~chr21:44675000-44700000,
chr21:43584881-43587240~~chr21:43609260-43610484,
chr21:43610740-43612903~~chr21:43644956-43647859,
chr21:43611033-43612871~~chr21:43645066-43647744,
chr21:43611046-43612875~~chr21:43644727-43647870,
chr21:43611054-43612862~~chr21:43644979-43647872,
chr21:43611060-43612869~~chr21:43644944-43647839,
chr21:43611069-43612877~~chr21:43644732-43647818,
chr21:43611293-43612797~~chr21:43644991-43647619,
chr21:43611315-43614495~~chr21:43644986-43647633,
chr21:43613276-43614563~~chr21:43645000-43647610,
chr21:43650000-43675000~~chr21:43750000-43775000,
chr21:43650000-43675000~~chr21:44325000-44350000,
chr21:43650000-43675000~~chr21:44775000-44800000,
chr21:6025000-6050000~~chr21:43575000-43600000,
chr21:6025000-6050000~~chr21:43600000-43625000,
chr21:6075000-6100000~~chr21:43600000-43625000,
chr21:6075000-6100000~~chr21:43625000-43650000,
chr21:6100000-6125000~~chr21:43600000-43625000,
chr21:6100000-6125000~~chr21:43625000-43650000,
chr21:6100000-6125000~~chr21:43650000-43675000,
chr21:6125000-6150000~~chr21:43575000-43600000,
chr21:6125000-6150000~~chr21:43625000-43650000,
chr21:6425000-6450000~~chr21:43575000-43600000,
chr21:6425000-6450000~~chr21:43625000-43650000,
chr21:6500000-6525000~~chr21:43625000-43650000,
chr21:6550000-6575000~~chr21:43600000-43625000,
chr21:6550000-6575000~~chr21:43625000-43650000,
chr21:6550000-6575000~~chr21:43650000-43675000,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
4DNFIQYQWPF5, GSE95015, 4DNFIHMCILEN, GSE43070, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, 4DNFIDSWKFF5, 4DNFIZ4F74QR, 4DNFI7H4II2V, ENCSR350NJV, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, 4DNFI9VXTBE2, 4DNFIKYXMF1E, 4DNFIWNNO89O, 4DNFIRKGMZRQ, GSE99541, ENCSR668RDP, 4DNFIL5K3MA1, 4DNFIS3DIH4V, 4DNFICEGAHRC, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, 4DNFIJ5DQZVK, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, 4DNFI8Y9SRP2, 4DNFIK61ILGM, GSE108869, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, 4DNFIBKZK63V, 4DNFIQWD8ZYD, GSE87112, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, ENCSR146FPM, 4DNFIOX3BGNE, 4DNFIBXWIH8J, 4DNFIJWBWE41, 4DNFICSTCJQZ, GSE155380, ENCSR587DSF, ENCSR452NHL, 4DNFIIMZB6Y9, GSE80820, GSE52457, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIXWCLD4M, 4DNFIAS8LV1C, 4DNFIV56OFE3, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, 4DNFI9815EEJ, 4DNFI9ZWZ5BS, 4DNFI2J1ODWB, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIS5F6EBL, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIT96Z365, 4DNFIH2A7IKF, 4DNFIWZEN3FF, ENCSR194SRI, 4DNFIBRSIPE4, 4DNFI6CWNUFL, 4DNFI5CGQ46V, 4DNFIR8OU6QJ, 4DNFIE8E4ANZ, GSE120294, GSE84022, 4DNFIPV5KFMK, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFIMEG1QIC, 4DNFIXU2KPNQ, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIFHU75I5, 4DNFIYD8LO9Z, 4DNFI15FPSQL, ENCSR444BAR, ENCSR123UVP, 4DNFIL9M97T2, 4DNFIJBJ6QVH, ENCSR550JLK, 4DNFI3A3VYWU, ENCSR637QCS, 4DNFIJ7OAIFQ, 4DNFIM2BMJ33, GSE165038, 4DNFIALNLR78, 4DNFIBY3UHJB, 4DNFIYDBBSE3, ENCSR379CII, 4DNFIEJEFCAM, 4DNFIQRTP7NM, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, GSE48592, ENCSR404HWQ, 4DNFIE5TEYK7, 4DNFIJ8JKKWJ, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, GSE58752, ENCSR507AHE, GSE116869, 4DNFI8649RQJ, 4DNFIRZA6EV6, GSE116875, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR545YBD, GSE126756, 4DNFIILDWK8M, 4DNFIP25GZGA, 4DNFI6EIFUZI, ENCSR866FWQ, 4DNFIBCIA62Q, 4DNFII6AN691, GSE111537, GSE131580, ENCSR981FNA, 4DNFIV239W4L, 4DNFIOUSETUP, ENCSR752QCX, ENCSR128RPG, 4DNFISTWNV9C, 4DNFI6JJQKFJ, 4DNFI1UEG1HD, GSE101921, ENCSR228TUX, 4DNFI8JFOAJT, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIQVMVRP6, ENCSR247RGI, ENCSR338WUS, 4DNFI5LCW273, 4DNFIP71EWXC, 4DNFINEQY95T, 4DNFILIM6FDL, 4DNFIHN2QSMX, 4DNFII84FBKM, 4DNFIVSCH2CH
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: True
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Involved cell types for DEG evidence: U2OS,CMK,P3HR-1
- Cohesin-DEGs, number of studies: 3
- Cohesin-DEGs, study: GSE140651,GSE154086,GSE89799
- Cohesin-DEGs, subunit: SMC1,Rad21,SA2