Deatailed information for gene ENSG00000160307

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  • Basic information
  • CohesinDB ID: CDBG00010465
  • Gene Symbol: S100B
  • Ensembl ID: ENSG00000160307
  • Gene locus: chr21:46598603-46605082 Strand: -
  • Gene type: protein_coding
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): True
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced): chr21-46594012-46594566, chr21-46596141-46599655, chr21-46600290-46601859, chr21-46602487-46602719, chr21-46603124-46603599, chr21-46604898-46606770, chr21-46608490-46609538, chr21-46634382-46636748,
  • Co-expression with cohesin genes Rho = 0.1482 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): 0.817
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.826
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: H1-hESC
  • Related loop: chr21:46598388-46600289~~chr21:46634449-46636635,
  • Cohesin-loop type: Direct,ChIAPET
  • Cohesin-loop study: Direct, ENCSR587DSF
  • Cohesin-loop subunit: Other,Rad21
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence: CordBlood,Kasumi-1
  • Cohesin-DEGs, number of studies: 2
  • Cohesin-DEGs, study: GSE73224,GSE47641
  • Cohesin-DEGs, subunit: Rad21
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