Deatailed information for gene ENSG00000184787
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00015797
- Gene Symbol: UBE2G2
- Ensembl ID: ENSG00000184787
-
Gene locus: chr21:44768579-44801820
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction,DEGs,
- Regulatory cohesin (double-evidenced):
chr21-42875265-42875657,
chr21-42875983-42876584,
chr21-42876831-42877399,
chr21-42877653-42880442,
chr21-42881000-42881276,
chr21-42881848-42882396,
chr21-42885959-42886266,
chr21-42888778-42889585,
chr21-42890204-42894569,
chr21-42895138-42895610,
chr21-42896014-42896815,
chr21-42897274-42897953,
chr21-42898298-42898649,
chr21-42898938-42900986,
chr21-42971699-42976556,
chr21-42977567-42978245,
chr21-42978524-42979165,
chr21-42979449-42979775,
chr21-42980073-42980693,
chr21-42981060-42983699,
chr21-42984049-42984123,
chr21-42984399-42985953,
chr21-42986206-42987380,
chr21-42987592-42989052,
chr21-42989441-42990324,
chr21-42991464-42993497,
chr21-42993747-42994516,
chr21-42996864-42997865,
chr21-42998695-42999369,
chr21-43328508-43351938,
chr21-43352261-43357227,
chr21-43357471-43370764,
chr21-43371758-43372139,
chr21-43372411-43378616,
chr21-43650183-43650609,
chr21-43652784-43653261,
chr21-43653524-43654073,
chr21-43654592-43655821,
chr21-43657025-43661637,
chr21-43663113-43663746,
chr21-43665582-43666779,
chr21-43667345-43668735,
chr21-43669130-43669692,
chr21-43669978-43670612,
chr21-43671144-43671960,
chr21-43672190-43672490,
chr21-43673349-43673603,
chr21-43949301-43950152,
chr21-43950547-43953443,
chr21-43953873-43955291,
chr21-43955636-43960547,
chr21-43960797-43961167,
chr21-43961712-43962335,
chr21-43962563-43962803,
chr21-43963229-43963703,
chr21-43964076-43965453,
chr21-43966040-43970312,
chr21-43970557-43970863,
chr21-43971213-43978635,
chr21-44049059-44050644,
chr21-44051500-44052149,
chr21-44058034-44059019,
chr21-44060331-44060715,
chr21-44061133-44061570,
chr21-44062415-44062878,
chr21-44063088-44064391,
chr21-44065260-44065880,
chr21-44066159-44066445,
chr21-44067082-44068169,
chr21-44069413-44070104,
chr21-44070382-44070916,
chr21-44071581-44073072,
chr21-44074197-44074929,
chr21-44077348-44077570,
chr21-44078553-44078867,
chr21-44079138-44079687,
chr21-44081500-44084368,
chr21-44084897-44085581,
chr21-44086043-44086366,
chr21-44086762-44089972,
chr21-44090357-44091197,
chr21-44093882-44094111,
chr21-44094969-44096191,
chr21-44279636-44308260,
chr21-44308534-44320510,
chr21-44320741-44336654,
chr21-44337821-44343795,
chr21-44344069-44346159,
chr21-44347920-44356379,
chr21-44356673-44361513,
chr21-44362261-44362548,
chr21-44362803-44363087,
chr21-44363857-44367810,
chr21-44368175-44372791,
chr21-44373234-44373624,
chr21-44374000-44381319,
chr21-44474734-44475102,
chr21-44477225-44484621,
chr21-44484854-44488529,
chr21-44488757-44489043,
chr21-44489948-44491135,
chr21-44493207-44494864,
chr21-44495074-44495354,
chr21-44496153-44497242,
chr21-44498019-44500523,
chr21-44501160-44501716,
chr21-44502563-44504881,
chr21-44505123-44507485,
chr21-44507767-44517880,
chr21-44518230-44523339,
chr21-44523567-44524569,
chr21-44524891-44530101,
chr21-44618432-44619258,
chr21-44705399-44713548,
chr21-44755085-44756295,
chr21-44756826-44769032,
chr21-44769388-44770132,
chr21-44770932-44775360,
chr21-44775568-44776159,
chr21-44778211-44780009,
chr21-44780867-44781685,
chr21-44784599-44786454,
chr21-44786700-44787596,
chr21-44788341-44788598,
chr21-44789666-44790323,
chr21-44791310-44795621,
chr21-44797363-44798119,
chr21-44799103-44805501,
chr21-44836322-44840030,
chr21-44842094-44850066,
chr21-44862997-44876511,
chr21-44876848-44922035,
chr21-44922496-44936465,
chr21-44937160-44937800,
chr21-44938036-44942579,
chr21-44943111-44946058,
chr21-44946260-44956117,
chr21-45124436-45132048,
chr21-45132786-45143934,
chr21-45145219-45145603,
chr21-45145953-45146151,
chr21-45147401-45149408,
chr21-45316533-45338135,
chr21-45339035-45339421,
chr21-45340328-45340876,
chr21-45341176-45342108,
chr21-45342847-45354233,
chr21-45447735-45461753,
chr21-45463590-45484721,
chr21-45725399-45726825,
chr21-45727437-45727820,
chr21-45733296-45733630,
chr21-45734384-45735074,
chr21-45736308-45737991,
chr21-45738350-45741362,
chr21-45741837-45742013,
chr21-45744922-45747032,
chr21-45747248-45748980,
-
Co-expression with cohesin genes Rho = 0.5845
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.218
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.815
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,DU145,GM12892,K1,hTERT-HME1,Spleen,H1-Mesendoderm,Olfactory,Hepatocyte-H9,GM19239,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,LNCaP,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,NCI-H1437,iPSC,Liver,ARPE-19,HCT-116,OCI-AML-3,Hep-G2,HT-1197,Kelly,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,NaiveB,GM19240,SU-DHL-4,HUVEC,HL-60,NPC-H9,CyT49-endoderm,RT-112,Skin-Fibroblast,Jurkat,CyT49-Gut,CC-2551,HAP1,HFF-hTERT,MCF7-FASR
- Related loop:
chr21:27500000-27525000~~chr21:44775000-44800000,
chr21:42875000-42900000~~chr21:44800000-44825000,
chr21:42975000-43000000~~chr21:44800000-44825000,
chr21:43350000-43375000~~chr21:44775000-44800000,
chr21:43350000-43375000~~chr21:44800000-44825000,
chr21:43650000-43675000~~chr21:44775000-44800000,
chr21:43950000-43975000~~chr21:44750000-44775000,
chr21:44050000-44075000~~chr21:44800000-44825000,
chr21:44075000-44100000~~chr21:44775000-44800000,
chr21:44075000-44100000~~chr21:44800000-44825000,
chr21:44300000-44325000~~chr21:44800000-44825000,
chr21:44325000-44350000~~chr21:44750000-44775000,
chr21:44325000-44350000~~chr21:44775000-44800000,
chr21:44325000-44350000~~chr21:44800000-44825000,
chr21:44337712-44340224~~chr21:44792463-44794394,
chr21:44350000-44375000~~chr21:44750000-44775000,
chr21:44350000-44375000~~chr21:44775000-44800000,
chr21:44475000-44500000~~chr21:44775000-44800000,
chr21:44500000-44525000~~chr21:44750000-44775000,
chr21:44500000-44525000~~chr21:44775000-44800000,
chr21:44505181-44506574~~chr21:44792488-44794438,
chr21:44509121-44511913~~chr21:44792385-44794491,
chr21:44509188-44511574~~chr21:44792239-44794440,
chr21:44509189-44512062~~chr21:44792150-44794532,
chr21:44509195-44511716~~chr21:44792591-44794447,
chr21:44509197-44511724~~chr21:44792559-44794303,
chr21:44509207-44511848~~chr21:44792389-44794429,
chr21:44509213-44512100~~chr21:44792156-44794493,
chr21:44509225-44511899~~chr21:44792192-44794515,
chr21:44509235-44511954~~chr21:44792155-44794858,
chr21:44509236-44511997~~chr21:44792073-44794483,
chr21:44509239-44511525~~chr21:44792488-44794374,
chr21:44509242-44511652~~chr21:44792257-44794053,
chr21:44509243-44511788~~chr21:44792303-44794463,
chr21:44509258-44511514~~chr21:44792553-44794330,
chr21:44509266-44512046~~chr21:44792219-44794436,
chr21:44509273-44511642~~chr21:44792534-44794311,
chr21:44509284-44511597~~chr21:44792564-44794485,
chr21:44509310-44511786~~chr21:44792445-44794502,
chr21:44509377-44511681~~chr21:44792242-44794455,
chr21:44509457-44512145~~chr21:44792168-44794432,
chr21:44509481-44512016~~chr21:44792235-44794464,
chr21:44509488-44511948~~chr21:44792109-44794449,
chr21:44509542-44511909~~chr21:44792296-44794494,
chr21:44509599-44512047~~chr21:44792203-44794435,
chr21:44509689-44512016~~chr21:44792155-44794487,
chr21:44509692-44511946~~chr21:44792297-44794482,
chr21:44509704-44511783~~chr21:44792291-44794265,
chr21:44509706-44511793~~chr21:44792098-44794805,
chr21:44509743-44512037~~chr21:44792110-44794473,
chr21:44509835-44511664~~chr21:44792662-44794245,
chr21:44509871-44511501~~chr21:44792580-44794252,
chr21:44509875-44511428~~chr21:44792634-44794192,
chr21:44509876-44511623~~chr21:44792577-44794368,
chr21:44509897-44511527~~chr21:44792516-44794254,
chr21:44509926-44511467~~chr21:44792610-44794266,
chr21:44510020-44511606~~chr21:44792567-44794217,
chr21:44618046-44619706~~chr21:44792109-44794449,
chr21:44618096-44619578~~chr21:44792564-44794485,
chr21:44707178-44708406~~chr21:44792109-44794449,
chr21:44750000-44775000~~chr21:45725000-45750000,
chr21:44754736-44756602~~chr21:44792156-44794493,
chr21:44775000-44800000~~chr21:44875000-44900000,
chr21:44775000-44800000~~chr21:44900000-44925000,
chr21:44775000-44800000~~chr21:44925000-44950000,
chr21:44775000-44800000~~chr21:45125000-45150000,
chr21:44799344-44802391~~chr21:44874408-44876218,
chr21:44799365-44801932~~chr21:44874652-44876234,
chr21:44799372-44802443~~chr21:44874407-44876256,
chr21:44799372-44802443~~chr21:44910613-44912668,
chr21:44799372-44802443~~chr21:44931965-44934113,
chr21:44799392-44802491~~chr21:44931992-44933524,
chr21:44799411-44802024~~chr21:44845318-44847256,
chr21:44799411-44802024~~chr21:44931881-44933864,
chr21:44799420-44802311~~chr21:44874548-44876442,
chr21:44799435-44802625~~chr21:44836063-44837863,
chr21:44799443-44802060~~chr21:44931925-44933520,
chr21:44799602-44802376~~chr21:44931909-44933980,
chr21:44799651-44802591~~chr21:44845216-44847176,
chr21:44799686-44802514~~chr21:44931456-44933916,
chr21:44799696-44802591~~chr21:44910581-44912708,
chr21:44799696-44802591~~chr21:44931870-44933936,
chr21:44799706-44802994~~chr21:44930823-44933918,
chr21:44799726-44802540~~chr21:44845295-44847056,
chr21:44799726-44802540~~chr21:44873123-44876204,
chr21:44800000-44825000~~chr21:44900000-44925000,
chr21:44800000-44825000~~chr21:44925000-44950000,
chr21:44800000-44825000~~chr21:45125000-45150000,
chr21:44800000-44825000~~chr21:45325000-45350000,
chr21:44800000-44825000~~chr21:45450000-45475000,
chr21:44800017-44802385~~chr21:44874479-44876246,
chr21:44800017-44802385~~chr21:44910606-44912868,
chr21:44800017-44802385~~chr21:44930976-44933923,
chr21:44800406-44801881~~chr21:44911198-44912387,
chr21:44800498-44802680~~chr21:44931107-44933966,
chr21:44800563-44802483~~chr21:44931469-44933956,
chr21:44800595-44801781~~chr21:44931962-44933491,
chr21:5025000-5050000~~chr21:44750000-44775000,
chr21:5100000-5125000~~chr21:44750000-44775000,
chr21:5100000-5125000~~chr21:44775000-44800000,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
GSE95015, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, ENCSR361AYD, 4DNFIDSWKFF5, GSE103148, 4DNFI7H4II2V, 4DNFIZ4F74QR, ENCSR350NJV, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, ENCSR113OIR, GSE99541, ENCSR668RDP, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, 4DNFIJ5DQZVK, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, 4DNFI8Y9SRP2, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, ENCSR000FDB, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, ENCSR833CMG, 4DNFIBKZK63V, ENCSR033GUP, 4DNFIQWD8ZYD, GSE87112, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, ENCSR146FPM, GSE155380, 4DNFIJWBWE41, ENCSR587DSF, ENCSR452NHL, 4DNFIIMZB6Y9, GSE80820, GSE52457, 4DNFIBT4EAKN, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, ENCSR991JXX, 4DNFI9815EEJ, 4DNFI9ZWZ5BS, 4DNFI2J1ODWB, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIWZEN3FF, ENCSR194SRI, 4DNFIBRSIPE4, 4DNFIR8OU6QJ, 4DNFI5CGQ46V, 4DNFIE8E4ANZ, GSE120294, GSE84022, ENCSR672RHL, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFIMEG1QIC, ENCSR732QOH, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIFHU75I5, 4DNFIYD8LO9Z, ENCSR444BAR, ENCSR550JLK, 4DNFI3A3VYWU, 4DNFIM2BMJ33, 4DNFIALNLR78, 4DNFIYDBBSE3, ENCSR386KHY, ENCSR379CII, 4DNFIEJEFCAM, ENCSR393LOP, 4DNFIPAF4PYT, ENCSR255XYX, ENCSR404HWQ, 4DNFIJ8JKKWJ, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, GSE58752, GSE116869, 4DNFI8649RQJ, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR545YBD, 4DNFIILDWK8M, ENCSR866FWQ, 4DNFI6EIFUZI, 4DNFII6AN691, GSE111537, GSE131580, ENCSR381DCY, ENCSR981FNA, 4DNFIV239W4L, ENCSR752QCX, ENCSR128RPG, ENCSR312TUD, 4DNFI1UEG1HD, GSE101921, ENCSR228TUX, 4DNFI8JFOAJT, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIQVMVRP6, ENCSR247RGI, ENCSR110JOO, 4DNFINEQY95T, 4DNFII84FBKM, 4DNFIVSCH2CH
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: True
-
Involved cell types for DEG evidence: K-562,HAP1,SLK,HeLa-S3
- Cohesin-DEGs, number of studies: 4
- Cohesin-DEGs, study: GSE126635,GSE131448,GSE138937,GSE130558
- Cohesin-DEGs, subunit: WAPL,CTCF,Rad21,SA2