Deatailed information for gene ENSG00000197381
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00017385
- Gene Symbol: ADARB1
- Ensembl ID: ENSG00000197381
-
Gene locus: chr21:45074579-45226560
Strand: +
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction,DEGs,
- Regulatory cohesin (double-evidenced):
chr21-43328508-43351938,
chr21-43352261-43357227,
chr21-43357471-43370764,
chr21-43371758-43372139,
chr21-43372411-43378616,
chr21-44077348-44077570,
chr21-44078553-44078867,
chr21-44079138-44079687,
chr21-44081500-44084368,
chr21-44084897-44085581,
chr21-44086043-44086366,
chr21-44086762-44089972,
chr21-44090357-44091197,
chr21-44093882-44094111,
chr21-44094969-44096191,
chr21-44244978-44251442,
chr21-44251673-44252226,
chr21-44252559-44252895,
chr21-44253503-44259739,
chr21-44260974-44262029,
chr21-44262549-44268928,
chr21-44270131-44273478,
chr21-44273834-44274503,
chr21-44274897-44275317,
chr21-44320741-44336654,
chr21-44337821-44343795,
chr21-44344069-44346159,
chr21-44347920-44356379,
chr21-44356673-44361513,
chr21-44362261-44362548,
chr21-44362803-44363087,
chr21-44363857-44367810,
chr21-44368175-44372791,
chr21-44373234-44373624,
chr21-44374000-44381319,
chr21-44474734-44475102,
chr21-44477225-44484621,
chr21-44484854-44488529,
chr21-44488757-44489043,
chr21-44489948-44491135,
chr21-44493207-44494864,
chr21-44495074-44495354,
chr21-44496153-44497242,
chr21-44498019-44500523,
chr21-44501160-44501716,
chr21-44502563-44504881,
chr21-44505123-44507485,
chr21-44507767-44517880,
chr21-44518230-44523339,
chr21-44523567-44524569,
chr21-44524891-44530101,
chr21-44571827-44575918,
chr21-44576197-44576477,
chr21-44578510-44580767,
chr21-44582105-44582686,
chr21-44583120-44583635,
chr21-44589306-44594970,
chr21-44596133-44596721,
chr21-44599082-44599579,
chr21-44648535-44651485,
chr21-44652014-44652466,
chr21-44652956-44653464,
chr21-44653790-44655119,
chr21-44655342-44656104,
chr21-44657623-44658306,
chr21-44658877-44659438,
chr21-44660721-44661286,
chr21-44661660-44661908,
chr21-44666337-44666984,
chr21-44669156-44669832,
chr21-44670503-44671575,
chr21-44672289-44672609,
chr21-44674682-44674829,
chr21-44770932-44775360,
chr21-44775568-44776159,
chr21-44778211-44780009,
chr21-44780867-44781685,
chr21-44784599-44786454,
chr21-44786700-44787596,
chr21-44788341-44788598,
chr21-44789666-44790323,
chr21-44791310-44795621,
chr21-44797363-44798119,
chr21-44799103-44805501,
chr21-44806825-44807985,
chr21-44808233-44808856,
chr21-44809850-44811758,
chr21-44812135-44814175,
chr21-44814747-44820942,
chr21-44823998-44825617,
chr21-44842094-44850066,
chr21-44850330-44851998,
chr21-44852235-44856871,
chr21-44857206-44857817,
chr21-44858153-44859485,
chr21-44860020-44862529,
chr21-44862997-44876511,
chr21-44876848-44922035,
chr21-44922496-44936465,
chr21-44937160-44937800,
chr21-44938036-44942579,
chr21-44943111-44946058,
chr21-44946260-44956117,
chr21-44956348-44960682,
chr21-44962017-44963405,
chr21-44964360-44974179,
chr21-44974593-45005352,
chr21-45006686-45007344,
chr21-45008165-45008852,
chr21-45009936-45023024,
chr21-45045516-45045738,
chr21-45048450-45052737,
chr21-45052983-45053282,
chr21-45053553-45057282,
chr21-45057634-45058340,
chr21-45058652-45059826,
chr21-45060132-45060733,
chr21-45061370-45061524,
chr21-45062133-45062540,
chr21-45063992-45064287,
chr21-45064693-45065698,
chr21-45067286-45068242,
chr21-45068723-45070692,
chr21-45070965-45077708,
chr21-45078393-45078715,
chr21-45078916-45079630,
chr21-45080769-45082062,
chr21-45082864-45083141,
chr21-45085838-45086729,
chr21-45086995-45087695,
chr21-45088081-45088374,
chr21-45091483-45092239,
chr21-45092882-45093760,
chr21-45094481-45095831,
chr21-45096100-45096976,
chr21-45097465-45100018,
chr21-45100319-45101486,
chr21-45101929-45103660,
chr21-45103974-45105286,
chr21-45105742-45106561,
chr21-45107832-45108500,
chr21-45108813-45111932,
chr21-45112347-45112730,
chr21-45113415-45114548,
chr21-45120399-45121586,
chr21-45123354-45124151,
chr21-45124436-45132048,
chr21-45132786-45143934,
chr21-45145219-45145603,
chr21-45145953-45146151,
chr21-45147401-45149408,
chr21-45150033-45150257,
chr21-45150601-45151290,
chr21-45151534-45152963,
chr21-45153404-45154346,
chr21-45154600-45155466,
chr21-45155889-45157161,
chr21-45157471-45158352,
chr21-45159622-45160462,
chr21-45161033-45162644,
chr21-45163388-45165275,
chr21-45167498-45168102,
chr21-45168865-45169440,
chr21-45169768-45170044,
chr21-45171104-45171438,
chr21-45172537-45173124,
chr21-45174479-45174770,
chr21-45175701-45177413,
chr21-45178090-45178594,
chr21-45179638-45180462,
chr21-45180932-45181355,
chr21-45181691-45182064,
chr21-45184914-45185224,
chr21-45192349-45192763,
chr21-45196891-45197376,
chr21-45199160-45199592,
chr21-45199827-45201411,
chr21-45201822-45203368,
chr21-45205334-45205638,
chr21-45206724-45207526,
chr21-45208102-45208832,
chr21-45209175-45210299,
chr21-45210540-45211407,
chr21-45211669-45211971,
chr21-45212249-45212719,
chr21-45218184-45218795,
chr21-45220299-45221191,
chr21-45221574-45224852,
chr21-45225776-45226165,
chr21-45226621-45226822,
chr21-45227667-45229205,
chr21-45229437-45230238,
chr21-45230812-45231502,
chr21-45232337-45232746,
chr21-45234188-45235217,
chr21-45236004-45236991,
chr21-45241381-45241632,
chr21-45242820-45243175,
chr21-45244770-45245359,
chr21-45245728-45247493,
chr21-45248289-45249416,
chr21-45249627-45249914,
chr21-45251073-45259845,
chr21-45261057-45263926,
chr21-45264207-45270973,
chr21-45276631-45278067,
chr21-45278276-45280924,
chr21-45281215-45285084,
chr21-45285295-45286241,
chr21-45286477-45297005,
chr21-45297393-45298845,
chr21-45299162-45312040,
chr21-45312982-45313691,
chr21-45316533-45338135,
chr21-45339035-45339421,
chr21-45340328-45340876,
chr21-45341176-45342108,
chr21-45342847-45354233,
chr21-45401908-45445613,
chr21-45447735-45461753,
chr21-45463590-45484721,
chr21-45487915-45502397,
chr21-45502617-45502900,
chr21-45503606-45519118,
chr21-45522806-45526243,
chr21-45526587-45546954,
chr21-45549108-45549455,
chr21-45549738-45561026,
chr21-45562524-45563196,
chr21-45569935-45572811,
chr21-45573733-45582416,
chr21-45583894-45584263,
chr21-45584853-45585303,
chr21-45585913-45586455,
chr21-45589437-45600222,
chr21-45674757-45675290,
chr21-45683752-45683985,
chr21-45694886-45695654,
chr21-45696519-45696831,
chr21-45698364-45699315,
chr21-45699705-45700787,
chr21-45725399-45726825,
chr21-45727437-45727820,
chr21-45733296-45733630,
chr21-45734384-45735074,
chr21-45736308-45737991,
chr21-45738350-45741362,
chr21-45741837-45742013,
chr21-45744922-45747032,
chr21-45747248-45748980,
chr21-45750046-45750324,
chr21-45751051-45751215,
chr21-45751471-45751832,
chr21-45756056-45756358,
chr21-45761715-45762780,
chr21-45763067-45763913,
chr21-45764145-45764583,
chr21-45764836-45765653,
chr21-45766057-45770234,
chr21-45770613-45771399,
chr21-45799954-45801669,
chr21-45801901-45802870,
chr21-45803374-45804235,
chr21-45804566-45806380,
chr21-45809423-45809839,
chr21-45810206-45810279,
chr21-45811128-45811479,
chr21-45812475-45812693,
chr21-45813685-45816501,
chr21-45816934-45824027,
chr21-45824560-45825827,
chr21-45826840-45830627,
chr21-45830839-45831391,
chr21-45831779-45832772,
chr21-45833478-45836709,
chr21-45837172-45837882,
chr21-45844115-45844699,
chr21-45845305-45846222,
chr21-45846697-45847005,
chr21-45847320-45849116,
chr21-45874401-45877128,
chr21-45877568-45881967,
chr21-45883995-45884251,
chr21-45885857-45888701,
chr21-45889019-45890378,
chr21-45891608-45894846,
chr21-45895276-45902934,
chr21-45905855-45907394,
chr21-45908410-45911399,
chr21-45911935-45913204,
chr21-45913451-45916964,
chr21-45917300-45917688,
chr21-45918949-45920374,
chr21-45921404-45925225,
chr21-45926057-45926739,
chr21-45927271-45927330,
chr21-45927607-45933291,
chr21-45933700-45935405,
chr21-45935980-45936491,
chr21-45937087-45942541,
chr21-45942760-45946249,
chr21-45947046-45949181,
chr21-45949436-45952197,
chr21-46094789-46101183,
chr21-46101525-46102239,
chr21-46107500-46107764,
chr21-46108827-46114343,
chr21-46114890-46141044,
-
Co-expression with cohesin genes Rho = 0.5294
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.548
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.846
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,DU145,Right-Ventricle,Keratinocytes192627,Aorta,GM12892,K1,hTERT-HME1,Spleen,H1-Mesenchymal,H1-Mesendoderm,Olfactory,Hepatocyte-H9,GM19239,HEK293T,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,LNCaP,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,NCI-H460,NCI-H1437,iPSC,Liver,ARPE-19,HCT-116,Germinal-Center-B,OCI-AML-3,Hep-G2,REC-1,HT-1197,Kelly,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,NaiveB,GM19240,U-937,BMEC,HUES64,SU-DHL-4,HUVEC,HL-60,NPC-H9,RT-112,Skin-Fibroblast,Left-Ventricle,KBM-7,Jurkat,CC-2551,CyT49-Gut,HAP1,HFF-hTERT,MCF7-FASR
- Related loop:
chr21:27500000-27525000~~chr21:45225000-45250000,
chr21:29850000-29875000~~chr21:45175000-45200000,
chr21:41425000-41450000~~chr21:45125000-45150000,
chr21:43350000-43375000~~chr21:45075000-45100000,
chr21:44075000-44100000~~chr21:45075000-45100000,
chr21:44075000-44100000~~chr21:45100000-45125000,
chr21:44075000-44100000~~chr21:45125000-45150000,
chr21:44250000-44275000~~chr21:45125000-45150000,
chr21:44325000-44350000~~chr21:45125000-45150000,
chr21:44350000-44375000~~chr21:45125000-45150000,
chr21:44350000-44375000~~chr21:45200000-45225000,
chr21:44475000-44500000~~chr21:45125000-45150000,
chr21:44500000-44525000~~chr21:45050000-45075000,
chr21:44500000-44525000~~chr21:45125000-45150000,
chr21:44500000-44525000~~chr21:45200000-45225000,
chr21:44509258-44511514~~chr21:45136441-45138077,
chr21:44575000-44600000~~chr21:45125000-45150000,
chr21:44650000-44675000~~chr21:45200000-45225000,
chr21:44775000-44800000~~chr21:45125000-45150000,
chr21:44800000-44825000~~chr21:45125000-45150000,
chr21:44850000-44875000~~chr21:45125000-45150000,
chr21:44875000-44900000~~chr21:45125000-45150000,
chr21:44925000-44950000~~chr21:45125000-45150000,
chr21:44946673-44947938~~chr21:45127808-45129737,
chr21:44948396-44951228~~chr21:45127428-45130286,
chr21:44948396-44951228~~chr21:45136536-45138234,
chr21:44948527-44950730~~chr21:45127507-45129698,
chr21:44948527-44950730~~chr21:45136541-45138119,
chr21:44948539-44951249~~chr21:45127847-45129707,
chr21:44948562-44951220~~chr21:45127912-45129676,
chr21:44948562-44951220~~chr21:45136498-45138268,
chr21:44948698-44951270~~chr21:45127524-45130258,
chr21:44948698-44951270~~chr21:45136501-45138215,
chr21:44948700-44950631~~chr21:45127849-45129698,
chr21:44948727-44951221~~chr21:45136469-45139375,
chr21:44948731-44951049~~chr21:45127805-45130063,
chr21:44948733-44950723~~chr21:45127850-45129763,
chr21:44948743-44951274~~chr21:45136451-45139374,
chr21:44948752-44951150~~chr21:45127809-45130230,
chr21:44948752-44951150~~chr21:45136612-45139341,
chr21:44948766-44950656~~chr21:45127629-45129847,
chr21:44948766-44950656~~chr21:45136554-45138213,
chr21:44948770-44950717~~chr21:45127870-45130316,
chr21:44948770-44950717~~chr21:45136548-45138031,
chr21:44948779-44951284~~chr21:45127832-45130027,
chr21:44948779-44951284~~chr21:45136502-45139352,
chr21:44948787-44950611~~chr21:45127704-45130101,
chr21:44948787-44951112~~chr21:45127846-45129697,
chr21:44948787-44951112~~chr21:45136436-45139361,
chr21:44948791-44951263~~chr21:45127819-45130264,
chr21:44948791-44951263~~chr21:45136550-45139365,
chr21:44948793-44950744~~chr21:45127871-45130307,
chr21:44948793-44950744~~chr21:45136509-45138178,
chr21:44948794-44951165~~chr21:45127459-45129775,
chr21:44948794-44951165~~chr21:45136439-45139361,
chr21:44948796-44951186~~chr21:45127884-45129649,
chr21:44948796-44951186~~chr21:45136521-45139366,
chr21:44948803-44950656~~chr21:45127827-45130309,
chr21:44948803-44950656~~chr21:45136575-45138049,
chr21:44948820-44951094~~chr21:45127808-45129737,
chr21:44948820-44951094~~chr21:45136445-45139357,
chr21:44948829-44950724~~chr21:45127849-45129741,
chr21:44948848-44951218~~chr21:45127807-45130392,
chr21:44948848-44951218~~chr21:45136459-45138096,
chr21:44948850-44951149~~chr21:45127879-45129713,
chr21:44948850-44951149~~chr21:45136526-45138224,
chr21:44948854-44950700~~chr21:45127904-45130105,
chr21:44948854-44950700~~chr21:45136689-45138114,
chr21:44948864-44951198~~chr21:45127863-45130143,
chr21:44948864-44951198~~chr21:45136453-45139353,
chr21:44948870-44950696~~chr21:45073682-45075829,
chr21:44948870-44950696~~chr21:45127901-45129571,
chr21:44948870-44950696~~chr21:45136553-45138016,
chr21:44948871-44951185~~chr21:45127466-45129726,
chr21:44948871-44951185~~chr21:45136470-45138237,
chr21:44948880-44951179~~chr21:45127837-45129997,
chr21:44948880-44951179~~chr21:45136471-45139356,
chr21:44948885-44951228~~chr21:45127863-45130232,
chr21:44948890-44951305~~chr21:45127500-45129746,
chr21:44948890-44951305~~chr21:45136450-45139355,
chr21:44948914-44951002~~chr21:45127480-45129775,
chr21:44948914-44951002~~chr21:45136550-45139351,
chr21:44948977-44950672~~chr21:45136564-45138054,
chr21:44948978-44951177~~chr21:45127867-45129720,
chr21:44948978-44951177~~chr21:45138180-45139338,
chr21:44948995-44950623~~chr21:45127704-45129669,
chr21:44949003-44950763~~chr21:45127859-45129704,
chr21:44949003-44950763~~chr21:45136551-45139385,
chr21:44949037-44950790~~chr21:45127879-45129458,
chr21:44949051-44950706~~chr21:45127908-45129655,
chr21:44949051-44950706~~chr21:45136497-45137989,
chr21:44949058-44950795~~chr21:45127982-45129449,
chr21:44949086-44950830~~chr21:45127945-45129475,
chr21:44949086-44950830~~chr21:45136441-45138077,
chr21:44949086-44950830~~chr21:45138096-45139345,
chr21:44949088-44950833~~chr21:45136218-45138062,
chr21:44949105-44950823~~chr21:45127883-45129461,
chr21:44949105-44950823~~chr21:45136391-45137996,
chr21:44949108-44950845~~chr21:45127928-45129446,
chr21:44949108-44950845~~chr21:45136553-45137918,
chr21:44949119-44951195~~chr21:45127782-45129672,
chr21:44949149-44950890~~chr21:45127914-45129475,
chr21:44949149-44950890~~chr21:45129555-45131317,
chr21:44949149-44950890~~chr21:45136373-45139344,
chr21:44949151-44950685~~chr21:45127888-45129651,
chr21:44949151-44950685~~chr21:45136540-45139040,
chr21:44949182-44950677~~chr21:45127891-45129697,
chr21:44949182-44950677~~chr21:45136649-45138012,
chr21:44949215-44950847~~chr21:45127943-45129454,
chr21:44949215-44950847~~chr21:45136480-45138022,
chr21:44949240-44950847~~chr21:45136576-45138071,
chr21:44949268-44950685~~chr21:45136592-45137879,
chr21:44950000-44975000~~chr21:45075000-45100000,
chr21:44950000-44975000~~chr21:45100000-45125000,
chr21:44950000-44975000~~chr21:45125000-45150000,
chr21:44961753-44963484~~chr21:45127832-45130027,
chr21:44975000-45000000~~chr21:45125000-45150000,
chr21:44975000-45000000~~chr21:45200000-45225000,
chr21:45000000-45025000~~chr21:45100000-45125000,
chr21:45000000-45025000~~chr21:45125000-45150000,
chr21:45044990-45046200~~chr21:45127480-45129775,
chr21:45050000-45075000~~chr21:45200000-45225000,
chr21:45073104-45076272~~chr21:45127837-45129997,
chr21:45075000-45100000~~chr21:45200000-45225000,
chr21:45098049-45099896~~chr21:45127459-45129775,
chr21:45098054-45099897~~chr21:45127466-45129726,
chr21:45098176-45099841~~chr21:45127847-45129707,
chr21:45098199-45099847~~chr21:45127871-45130307,
chr21:45098212-45099854~~chr21:45127500-45129746,
chr21:45098216-45099888~~chr21:45127480-45129775,
chr21:45098336-45099838~~chr21:45127832-45130027,
chr21:45098340-45099748~~chr21:45127945-45129475,
chr21:45098340-45099756~~chr21:45127809-45130230,
chr21:45098352-45099841~~chr21:45136497-45137989,
chr21:45098367-45099786~~chr21:45127883-45129461,
chr21:45098370-45099878~~chr21:45127837-45129997,
chr21:45098378-45099734~~chr21:45129555-45131317,
chr21:45098380-45099783~~chr21:45127879-45129458,
chr21:45100000-45125000~~chr21:45200000-45225000,
chr21:45101917-45103625~~chr21:45127837-45129997,
chr21:45102083-45103514~~chr21:45127466-45129726,
chr21:45125000-45150000~~chr21:45225000-45250000,
chr21:45125000-45150000~~chr21:45250000-45275000,
chr21:45125000-45150000~~chr21:45275000-45300000,
chr21:45125000-45150000~~chr21:45300000-45325000,
chr21:45125000-45150000~~chr21:45325000-45350000,
chr21:45125000-45150000~~chr21:45425000-45450000,
chr21:45125000-45150000~~chr21:45450000-45475000,
chr21:45125000-45150000~~chr21:45500000-45525000,
chr21:45125000-45150000~~chr21:45525000-45550000,
chr21:45125000-45150000~~chr21:45550000-45575000,
chr21:45125000-45150000~~chr21:45575000-45600000,
chr21:45125000-45150000~~chr21:45750000-45775000,
chr21:45125000-45150000~~chr21:45800000-45825000,
chr21:45125000-45150000~~chr21:45825000-45850000,
chr21:45125000-45150000~~chr21:45875000-45900000,
chr21:45125000-45150000~~chr21:45900000-45925000,
chr21:45125000-45150000~~chr21:46100000-46125000,
chr21:45136439-45139361~~chr21:45438127-45440654,
chr21:45136450-45139355~~chr21:45818438-45821813,
chr21:45136469-45139375~~chr21:45817787-45821574,
chr21:45139534-45141238~~chr21:45438384-45440554,
chr21:45139554-45141260~~chr21:45438127-45440654,
chr21:45139554-45141260~~chr21:45817765-45819179,
chr21:45139554-45141260~~chr21:45819453-45821601,
chr21:45139555-45141248~~chr21:45438460-45440575,
chr21:45139555-45141248~~chr21:45595927-45597822,
chr21:45139555-45141248~~chr21:45819512-45821569,
chr21:45139579-45141230~~chr21:45438202-45440761,
chr21:45139601-45141264~~chr21:45438059-45440543,
chr21:45139623-45141236~~chr21:45438345-45440658,
chr21:45139624-45141292~~chr21:45438383-45440733,
chr21:45139624-45141292~~chr21:45879491-45881481,
chr21:45139629-45141295~~chr21:45438049-45440695,
chr21:45139650-45141317~~chr21:45438318-45440592,
chr21:45139658-45141304~~chr21:45438366-45440780,
chr21:45139673-45141222~~chr21:45438105-45440682,
chr21:45139688-45141261~~chr21:45438098-45440775,
chr21:45139688-45141261~~chr21:45817813-45819059,
chr21:45139688-45141261~~chr21:45819215-45821572,
chr21:45139693-45141316~~chr21:45269360-45271607,
chr21:45139694-45141242~~chr21:45438439-45440623,
chr21:45139699-45141285~~chr21:45235955-45237401,
chr21:45139699-45141285~~chr21:45438142-45440624,
chr21:45139699-45141285~~chr21:45818578-45821611,
chr21:45139700-45141225~~chr21:45438474-45440647,
chr21:45139703-45141220~~chr21:45438433-45440517,
chr21:45139703-45141220~~chr21:45819757-45821509,
chr21:45139731-45141427~~chr21:45236007-45237339,
chr21:45139731-45141427~~chr21:45438417-45440836,
chr21:45139731-45141427~~chr21:45818438-45821813,
chr21:45139732-45141221~~chr21:45269444-45271544,
chr21:45139734-45141308~~chr21:45438099-45440648,
chr21:45139734-45141308~~chr21:45819513-45821757,
chr21:45139737-45141278~~chr21:45308098-45309917,
chr21:45139737-45141278~~chr21:45438575-45440579,
chr21:45139742-45141196~~chr21:45308481-45309869,
chr21:45139742-45141196~~chr21:45438737-45440429,
chr21:45139752-45141201~~chr21:45438594-45440402,
chr21:45139756-45141227~~chr21:45256456-45257780,
chr21:45139756-45141227~~chr21:45286276-45287465,
chr21:45139756-45141227~~chr21:45427127-45428797,
chr21:45139756-45141227~~chr21:45438129-45440499,
chr21:45139756-45141227~~chr21:45477292-45479145,
chr21:45139756-45141227~~chr21:45595881-45597823,
chr21:45139756-45141227~~chr21:45819438-45821567,
chr21:45139756-45141227~~chr21:45879726-45881542,
chr21:45139756-45141227~~chr21:45922568-45924115,
chr21:45139772-45141201~~chr21:45308090-45309979,
chr21:45139772-45141201~~chr21:45438414-45440537,
chr21:45139773-45141251~~chr21:45235891-45237378,
chr21:45139773-45141251~~chr21:45438069-45440905,
chr21:45139777-45141216~~chr21:45818539-45821603,
chr21:45139825-45141312~~chr21:45235909-45237329,
chr21:45139825-45141312~~chr21:45438277-45440446,
chr21:45139825-45141312~~chr21:45819878-45821577,
chr21:45139844-45141294~~chr21:45438469-45440424,
chr21:45139849-45141273~~chr21:45308581-45309918,
chr21:45139849-45141273~~chr21:45438598-45440391,
chr21:45139858-45141276~~chr21:45438511-45440385,
chr21:45139859-45141236~~chr21:45438572-45440279,
chr21:45139859-45141236~~chr21:45879927-45881351,
chr21:45139873-45141121~~chr21:45438877-45440262,
chr21:45139887-45141209~~chr21:45438578-45440270,
chr21:45150000-45175000~~chr21:45250000-45275000,
chr21:45150000-45175000~~chr21:45275000-45300000,
chr21:45150000-45175000~~chr21:45425000-45450000,
chr21:45150000-45175000~~chr21:45450000-45475000,
chr21:45150000-45175000~~chr21:45725000-45750000,
chr21:45150000-45175000~~chr21:45800000-45825000,
chr21:45151104-45153330~~chr21:45269360-45271607,
chr21:45151182-45153539~~chr21:45307919-45309932,
chr21:45151182-45153539~~chr21:45438127-45440654,
chr21:45151234-45153330~~chr21:45438098-45440775,
chr21:45151445-45153499~~chr21:45438460-45440575,
chr21:45151535-45153313~~chr21:45235859-45237361,
chr21:45151610-45153626~~chr21:45438417-45440836,
chr21:45151733-45153242~~chr21:45308637-45309801,
chr21:45151747-45153264~~chr21:45438277-45440446,
chr21:45200000-45225000~~chr21:45325000-45350000,
chr21:45200000-45225000~~chr21:45450000-45475000,
chr21:45200000-45225000~~chr21:45675000-45700000,
chr21:45200000-45225000~~chr21:45725000-45750000,
chr21:45200000-45225000~~chr21:45750000-45775000,
chr21:45200000-45225000~~chr21:45800000-45825000,
chr21:45200000-45225000~~chr21:45900000-45925000,
chr21:45200000-45225000~~chr21:45925000-45950000,
chr21:45200000-45225000~~chr21:46100000-46125000,
chr21:45225000-45250000~~chr21:45325000-45350000,
chr21:5100000-5125000~~chr21:45100000-45125000,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
4DNFIQYQWPF5, GSE95015, GSE43070, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, ENCSR361AYD, 4DNFIDSWKFF5, GSE103148, 4DNFI7H4II2V, 4DNFIZ4F74QR, ENCSR350NJV, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, ENCSR113OIR, 4DNFI9VXTBE2, 4DNFIRKGMZRQ, GSE99541, ENCSR668RDP, GSE97394, 4DNFICEGAHRC, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, 4DNFIJ5DQZVK, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, GSE112000, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, ENCSR000FDB, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, ENCSR833CMG, 4DNFIBKZK63V, ENCSR033GUP, 4DNFIQWD8ZYD, GSE87112, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, GSE126792, ENCSR146FPM, 4DNFIBXWIH8J, 4DNFIJWBWE41, 4DNFICSTCJQZ, GSE155380, ENCSR587DSF, ENCSR452NHL, 4DNFIIMZB6Y9, GSE80820, GSE52457, 4DNFIBT4EAKN, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIXWCLD4M, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, ENCSR991JXX, 4DNFI9815EEJ, 4DNFI9ZWZ5BS, 4DNFI2J1ODWB, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIS5F6EBL, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIT96Z365, 4DNFIWZEN3FF, 4DNFIBRSIPE4, 4DNFI6CWNUFL, 4DNFI5CGQ46V, 4DNFIR8OU6QJ, 4DNFIE8E4ANZ, GSE120294, GSE84022, 4DNFIPV5KFMK, ENCSR672RHL, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFI5ERM9J7, 4DNFIMEG1QIC, 4DNFIXU2KPNQ, ENCSR732QOH, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIFHU75I5, 4DNFIYD8LO9Z, ENCSR444BAR, ENCSR123UVP, 4DNFIL9M97T2, ENCSR550JLK, 4DNFI3A3VYWU, 4DNFIM2BMJ33, 4DNFIX4PJKXZ, GSE165038, 4DNFIALNLR78, ENCSR386KHY, ENCSR379CII, 4DNFIEJEFCAM, 4DNFIQRTP7NM, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, GSE48592, ENCSR255XYX, ENCSR404HWQ, 4DNFIJ8JKKWJ, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, GSE58752, ENCSR507AHE, GSE116869, 4DNFI8649RQJ, GSE116875, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR545YBD, 4DNFIILDWK8M, 4DNFIP25GZGA, 4DNFI6EIFUZI, ENCSR489OCU, ENCSR866FWQ, GSE111537, GSE131580, ENCSR381DCY, ENCSR981FNA, 4DNFIV239W4L, ENCSR752QCX, ENCSR128RPG, 4DNFISTWNV9C, ENCSR312TUD, 4DNFI1UEG1HD, GSE101921, ENCSR228TUX, 4DNFIZF1KI43, 4DNFI8JFOAJT, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIQVMVRP6, ENCSR247RGI, ENCSR110JOO, ENCSR338WUS, 4DNFI5LCW273, 4DNFIP71EWXC, 4DNFINEQY95T, 4DNFIHN2QSMX, 4DNFII84FBKM
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: True
-
Involved cell types for DEG evidence: SLK,OCI-AML-3,P3HR-1,K-562,MCF-10A,HeLa-S3,Keratinocytes
- Cohesin-DEGs, number of studies: 11
- Cohesin-DEGs, study: GSE83870,GSE140651,GSE111537,GSE101921,GSE154086,GSE131448,GSE138937,GSE130558
- Cohesin-DEGs, subunit: SMC3,SA2,WAPL,CTCF,SMC1,Rad21