Deatailed information for gene ENSG00000205927
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00020296
- Gene Symbol: OLIG2
- Ensembl ID: ENSG00000205927
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Gene locus: chr21:33025934-33029196
Strand: +
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = -0.0518
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.806
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: HEK293T,iPSC,NPC-H9,K-562,H1-hESC,A-549,HFF-hTERT,MCF7-FASR,H9-hESC,HUES64,HUVEC
- Related loop:
chr21:32500000-32525000~~chr21:33025000-33050000,
chr21:32825000-32850000~~chr21:33000000-33025000,
chr21:32900000-32925000~~chr21:33000000-33025000,
chr21:32925000-32950000~~chr21:33025000-33050000,
chr21:33000000-33025000~~chr21:33100000-33125000,
chr21:33000000-33025000~~chr21:33125000-33150000,
chr21:33024317-33026272~~chr21:33126060-33128582,
chr21:33024339-33026293~~chr21:33126076-33128364,
chr21:33025000-33050000~~chr21:33125000-33150000,
chr21:33025000-33050000~~chr21:33325000-33350000,
chr21:33025000-33050000~~chr21:33375000-33400000,
chr21:33025000-33050000~~chr21:33425000-33450000,
chr21:33025000-33050000~~chr21:33450000-33475000,
chr21:33025000-33050000~~chr21:36675000-36700000,
chr21:33025000-33050000~~chr21:36700000-36725000,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
GSE44267, 4DNFI8649RQJ, ENCSR247RGI, 4DNFI5LCW273, Direct, GSE94872, GSE118716, 4DNFIDKJFK2S, GSE105028, ENCSR499RVD, GSE120294, ENCSR244BBG, GSE97394, 4DNFIILDWK8M, 4DNFIZ4F74QR, 4DNFIIMZB6Y9, 4DNFIVSCH2CH
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .