Deatailed information for gene ENSG00000206802
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00020563
- Gene Symbol: RNU6-926P
- Ensembl ID: ENSG00000206802
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Gene locus: chr21:26190706-26190813
Strand: +
- Gene type: snRNA
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.0125
FDR = 0.1103
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: IMR-90,MB157,Keratinocytes192627,H1-Mesenchymal,Olfactory,MCF-7,SARS-Cov2-olfactory,GM12878,A-549,CyT49-pancreatic,HFFc6,HeLa-S3,H9-hESC,iPSC,H1-hESC,HCC1599,Motor-Neuron,HUVEC,RT-112,CyT49-endoderm,HFF-hTERT,HAP1
- Related loop:
chr21:25575000-25600000~~chr21:26175000-26200000,
chr21:25600000-25625000~~chr21:26175000-26200000,
chr21:25850000-25875000~~chr21:26175000-26200000,
chr21:25875000-25900000~~chr21:26175000-26200000,
chr21:26175000-26200000~~chr21:26375000-26400000,
chr21:26175000-26200000~~chr21:26675000-26700000,
chr21:26175000-26200000~~chr21:26700000-26725000,
chr21:26175000-26200000~~chr21:27500000-27525000,
chr21:26175000-26200000~~chr21:28725000-28750000,
chr21:26175000-26200000~~chr21:29075000-29100000,
- Cohesin-loop type: HiChIP,HiC,Direct
- Cohesin-loop study:
4DNFIQWD8ZYD, 4DNFI8649RQJ, 4DNFI3CFMRID, 4DNFIWZEN3FF, GSE94872, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR852KQC, 4DNFIPV5KFMK, 4DNFIZ4F74QR, ENCSR410MDC, ENCSR866FWQ, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIA6NSSBJ, 4DNFII6AN691, GSE155380, 4DNFIJWBWE41, 4DNFIL9M97T2, 4DNFIIMZB6Y9, 4DNFI1E6NJQJ, GSE52457, Direct, 4DNFISPUVQHA, 4DNFIYDBBSE3, 4DNFI1UEG1HD, 4DNFIYIAUEPW, 4DNFIEJEFCAM, ENCSR228TUX, GSE116872, ENCSR393LOP, 4DNFI9815EEJ, 4DNFIC3HAU11, 4DNFI5LCW273, 4DNFIFI6NIKJ, 4DNFIFLJLIS5, ENCSR094EIC, 4DNFIDZT7PR8, 4DNFIZGCA8AH, GSE105028, 4DNFIBKZK63V, GSE116869, 4DNFII84FBKM
- Cohesin-loop subunit: Other,SMC1
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .