Deatailed information for gene ENSG00000212136

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  • Basic information
  • CohesinDB ID: CDBG00021765
  • Gene Symbol: RNU6-696P
  • Ensembl ID: ENSG00000212136
  • Gene locus: chr21:37045529-37045636 Strand: +
  • Gene type: snRNA
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.0529 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): -0.000
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: GM12878,K-562,HFF-hTERT,NaiveB,MCF7-FASR,HeLa-S3
  • Related loop: chr21:34350000-34375000~~chr21:37050000-37075000, chr21:36725000-36750000~~chr21:37050000-37075000, chr21:36950000-36975000~~chr21:37050000-37075000, chr21:37050000-37075000~~chr21:37250000-37275000, chr21:37050000-37075000~~chr21:37525000-37550000,
  • Cohesin-loop type: HiC,Direct
  • Cohesin-loop study: 4DNFI8649RQJ, 4DNFIVJ3IIQL, Direct, GSE118716, 4DNFISPUVQHA, 4DNFIDBIEXI7, 4DNFI1UEG1HD, GSE84022, ENCSR410MDC
  • Cohesin-loop subunit: Other
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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