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Basic information

CohesinDB ID: CDBG00022327

Gene Symbol: H2AZP1

Ensembl ID: ENSG00000213440

Gene locus: chr21:44046346-44047041 Strand: -

Gene type: processed_pseudogene

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction,

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.2473 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): 0.467
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,H1-Mesendoderm,MCF-7,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,HeLa-S3,H9-hESC,iPSC,REC-1,HCT-116,Hep-G2,H1-hESC,HCC1599,Motor-Neuron,NaiveB,U-937,CyT49-hESC,HL-60,CyT49-endoderm,KBM-7,CyT49-Gut,HFF-hTERT,HAP1,MCF7-FASR

Cohesin-loop type: HiChIP,HiC,Direct

Cohesin-loop study: 4DNFIH2A7IKF, 4DNFI8649RQJ, 4DNFIQYQWPF5, ENCSR662QKG, GSE95015, ENCSR194SRI, GSE116875, 4DNFIBRSIPE4, 4DNFIR8OU6QJ, 4DNFI5CGQ46V, 4DNFIDJ2JZ7Q, 4DNFIMROE6N4, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, ENCSR794RDS, GSE116869, ENCSR545YBD, ENCSR852KQC, GSE84022, 4DNFIDSWKFF5, 4DNFIILDWK8M, 4DNFI7H4II2V, 4DNFIZ4F74QR, 4DNFIEYQ5ZIR, 4DNFIBM714BP, 4DNFIREVU1Z5, 4DNFIXU2KPNQ, 4DNFII6AN691, 4DNFIKYXMF1E, GSE131580, 4DNFICSTCJQZ, ENCSR123UVP, 4DNFIIMZB6Y9, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFIJBJ6QVH, GSE52457, ENCSR637QCS, 4DNFIM2BMJ33, Direct, GSE165038, 4DNFISPUVQHA, 4DNFIV56OFE3, 4DNFI6JJQKFJ, 4DNFI1UEG1HD, 4DNFIYDBBSE3, GSE101921, GSE116872, ENCSR244BBG, ENCSR228TUX, ENCSR393LOP, 4DNFI9815EEJ, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIPAF4PYT, 4DNFI9ZWZ5BS, 4DNFI5LCW273, 4DNFI7XAZNNQ, 4DNFIJ8JKKWJ, 4DNFIDKJFK2S, 4DNFIFLJLIS5, 4DNFILIM6FDL, 4DNFIDBIEXI7, 4DNFINEQY95T, 4DNFIP71EWXC, 4DNFIQ2687RT, GSE105028, 4DNFIH7TH4MF, 4DNFIT96Z365

Cohesin-loop subunit: CTCF,Other,SMC1

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

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Deatailed information for gene ENSG00000213440