Deatailed information for gene ENSG00000214867

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  • Basic information
  • CohesinDB ID: CDBG00022925
  • Gene Symbol: SRSF9P1
  • Ensembl ID: ENSG00000214867
  • Gene locus: chr21:36295172-36295702 Strand: -
  • Gene type: processed_pseudogene
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.0841 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): 0.495
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: iPSC,OCI-AML-3,GM12878,Hep-G2,H1-hESC,A-549,HFFc6,HeLa-S3,H9-hESC
  • Related loop: chr21:27500000-27525000~~chr21:36275000-36300000, chr21:34350000-34375000~~chr21:36275000-36300000, chr21:34350000-34375000~~chr21:36300000-36325000, chr21:35025000-35050000~~chr21:36300000-36325000, chr21:36125000-36150000~~chr21:36300000-36325000, chr21:36150000-36175000~~chr21:36300000-36325000, chr21:36300000-36325000~~chr21:39175000-39200000,
  • Cohesin-loop type: HiChIP,HiC,Direct
  • Cohesin-loop study: 4DNFIQYQWPF5, 4DNFISTWNV9C, ENCSR244BBG, 4DNFIEYQ5ZIR, 4DNFI5LCW273, 4DNFI2J1ODWB, Direct, 4DNFIMROE6N4, GSE111537, 4DNFIFLJLIS5, 4DNFI1UEG1HD, 4DNFI5SUHCGZ, ENCSR410MDC, 4DNFIJWBWE41, 4DNFICSTCJQZ, 4DNFIEJEFCAM, 4DNFIOX3BGNE, 4DNFICEGAHRC, 4DNFIIMZB6Y9, 4DNFIVSCH2CH
  • Cohesin-loop subunit: CTCF,Other
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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