Deatailed information for gene ENSG00000215559

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  • Basic information
  • CohesinDB ID: CDBG00023175
  • Gene Symbol: ANKRD20A11P
  • Ensembl ID: ENSG00000215559
  • Gene locus: chr21:13909573-13979911 Strand: -
  • Gene type: transcribed_unprocessed_pseudogene
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.2468 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): 0.740
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: MCF-7,CyT49-endoderm,TAMR-MCF7,A-549,HFFc6,MCF7-FASR,CyT49-hESC
  • Related loop: chr21:13500000-13525000~~chr21:13950000-13975000, chr21:13800000-13825000~~chr21:13950000-13975000, chr21:13800000-13825000~~chr21:13975000-14000000, chr21:13875000-13900000~~chr21:13975000-14000000, chr21:13975000-14000000~~chr21:14075000-14100000, chr21:9075000-9100000~~chr21:13975000-14000000,
  • Cohesin-loop type: HiC,Direct
  • Cohesin-loop study: 4DNFIKYXMF1E, Direct, GSE118716, 4DNFIYDBBSE3, 4DNFI5SUHCGZ, ENCSR244BBG
  • Cohesin-loop subunit: Other
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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