Deatailed information for gene ENSG00000224602

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  • Basic information
  • CohesinDB ID: CDBG00025438
  • Gene Symbol: RPS26P5
  • Ensembl ID: ENSG00000224602
  • Gene locus: chr21:16121309-16121644 Strand: -
  • Gene type: processed_pseudogene
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.0420 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): -0.000
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: HFF-hTERT,HeLa-S3,H1-hESC
  • Related loop: chr21:14950000-14975000~~chr21:16125000-16150000, chr21:16100000-16125000~~chr21:16275000-16300000, chr21:16115735-16118594~~chr21:16193491-16195671, chr21:16125000-16150000~~chr21:16600000-16625000,
  • Cohesin-loop type: HiC,Direct,ChIAPET
  • Cohesin-loop study: 4DNFIQVMVRP6, Direct, ENCSR587DSF, 4DNFIW8TIFI5, 4DNFI7H4II2V
  • Cohesin-loop subunit: Other,Rad21
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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