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Basic information

CohesinDB ID: CDBG00026429

Gene Symbol: MEMO1P1

Ensembl ID: ENSG00000226054

Gene locus: chr21:36130488-36131376 Strand: +

Gene type: processed_pseudogene

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction,

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.4625 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): 0.331
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,Keratinocytes192627,K1,Olfactory,MCF-7,SARS-Cov2-olfactory,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,HeLa-S3,H9-hESC,iPSC,REC-1,OCI-AML-3,HCT-116,Hep-G2,H1-hESC,Motor-Neuron,HUES64,HUVEC,CyT49-hESC,RT-112,CyT49-endoderm,Skin-Fibroblast,CyT49-Gut,CC-2551,HAP1,HFF-hTERT

Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET

Cohesin-loop study: 4DNFI8649RQJ, 4DNFIQYQWPF5, ENCSR662QKG, GSE95015, 4DNFIWZEN3FF, GSE116875, 4DNFIR8OU6QJ, 4DNFI5CGQ46V, 4DNFIMROE6N4, GSE118716, 4DNFITUOMFUQ, 4DNFIE8E4ANZ, ENCSR499RVD, GSE94872, GSE116869, 4DNFI5SUHCGZ, ENCSR545YBD, ENCSR852KQC, GSE120294, 4DNFIDSWKFF5, 4DNFIZ4F74QR, 4DNFI7H4II2V, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFIMEG1QIC, ENCSR732QOH, 4DNFI6EIFUZI, 4DNFIA6NSSBJ, 4DNFIF2D3TL9, 4DNFIKYXMF1E, GSE99541, GSE111537, GSE155380, 4DNFIJWBWE41, 4DNFICSTCJQZ, ENCSR123UVP, GSE97394, 4DNFICEGAHRC, 4DNFIIMZB6Y9, 4DNFIL9M97T2, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, 4DNFI3A3VYWU, 4DNFIM2BMJ33, 4DNFIX4PJKXZ, Direct, ENCSR314HAC, 4DNFISPUVQHA, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFIYDBBSE3, 4DNFI1UEG1HD, GSE101921, GSE108869, 4DNFIYIAUEPW, 4DNFIEJEFCAM, ENCSR228TUX, ENCSR244BBG, ENCSR393LOP, 4DNFI9815EEJ, 4DNFIAWVDQ8C, 4DNFIC3HAU11, 4DNFIOCW5AEM, ENCSR305RTT, 4DNFI9ZWZ5BS, 4DNFI5LCW273, 4DNFIE5TEYK7, 4DNFIVJ3IIQL, 4DNFIJ8JKKWJ, 4DNFIP71EWXC, 4DNFIFLJLIS5, 4DNFINEQY95T, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIQ2687RT, 4DNFIS5F6EBL, 4DNFIHN2QSMX, 4DNFIH7TH4MF, GSE105028, 4DNFII84FBKM

Cohesin-loop subunit: SMC1,CTCF,Other,Rad21

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

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Deatailed information for gene ENSG00000226054