Deatailed information for gene ENSG00000233316

Check detailed explainations here

  • Basic information
  • CohesinDB ID: CDBG00031356
  • Gene Symbol: DSCR10
  • Ensembl ID: ENSG00000233316
  • Gene locus: chr21:38206155-38208644 Strand: +
  • Gene type: lncRNA
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.1028 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): 0.981
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: MCF-7,GM12878,Hep-G2,MCF-10A,H1-hESC,CC-2551,Motor-Neuron,HAP1,HeLa-S3,Olfactory,HUVEC
  • Related loop: chr21:38200000-38225000~~chr21:38325000-38350000, chr21:38200000-38225000~~chr21:38350000-38375000, chr21:38200000-38225000~~chr21:39125000-39150000,
  • Cohesin-loop type: HiC,Direct
  • Cohesin-loop study: 4DNFI1E6NJQJ, 4DNFI9YAVTI1, 4DNFIOCW5AEM, 4DNFIMEG1QIC, ENCSR305RTT, 4DNFI6EIFUZI, 4DNFI9ZWZ5BS, ENCSR194SRI, Direct, GSE94872, GSE99541, 4DNFIBY3UHJB, 4DNFIZGCA8AH, GSE101921, 4DNFICSTCJQZ, ENCSR228TUX, 4DNFI8JFOAJT
  • Cohesin-loop subunit: Other
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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