Browse_each

Basic information

CohesinDB ID: CDBG00031675

Gene Symbol: PSMA6P3

Ensembl ID: ENSG00000233767

Gene locus: chr21:46072084-46072248 Strand: -

Gene type: processed_pseudogene

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.0798 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): 0.981
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: HEK293T,Liver,IMR-90,K-562,H1-hESC,HFF-hTERT,HFFc6,MCF7-FASR,HeLa-S3,H9-hESC,H1-Mesendoderm,HUVEC

Cohesin-loop type: HiC,Direct

Cohesin-loop study: GSE44267, GSE52457, 4DNFIWZEN3FF, 4DNFIM2BMJ33, Direct, 4DNFIMROE6N4, 4DNFIFI6NIKJ, GSE118716, GSE105028, GSE94872, 4DNFIDBIEXI7, 4DNFI5SUHCGZ, ENCSR852KQC, 4DNFIJWBWE41, 4DNFIH7TH4MF, GSE58752, 4DNFII84FBKM, 4DNFIOX3BGNE, 4DNFIW8TIFI5

Cohesin-loop subunit: Other

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

eachgene

Deatailed information for gene ENSG00000233767