Deatailed information for gene ENSG00000234008
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00031839
- Gene Symbol: PPP1R2P2
- Ensembl ID: ENSG00000234008
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Gene locus: chr21:35887194-35887807
Strand: +
- Gene type: processed_pseudogene
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.1257
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.981
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: MCF-7,Hep-G2,TAMR-MCF7,H1-hESC,HFF-hTERT,MCF7-FASR,K1
- Related loop:
chr21:35875000-35900000~~chr21:35975000-36000000,
chr21:35875000-35900000~~chr21:36025000-36050000,
chr21:35885539-35887170~~chr21:35931737-35934622,
chr21:35885539-35887170~~chr21:35939398-35941355,
chr21:35885577-35887971~~chr21:35939344-35941327,
chr21:35885577-35887971~~chr21:36027779-36029476,
chr21:35885747-35886950~~chr21:36027752-36029478,
- Cohesin-loop type: HiC,Direct,ChIAPET
- Cohesin-loop study:
4DNFIE8T8JZ8, Direct, ENCSR314HAC, GSE118716, 4DNFISPUVQHA, ENCSR146FPM, ENCSR587DSF
- Cohesin-loop subunit: Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .