Browse_each

Basic information

CohesinDB ID: CDBG00032428

Gene Symbol: MIR155HG

Ensembl ID: ENSG00000234883

Gene locus: chr21:25561908-25575168 Strand: +

Gene type: lncRNA

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction,

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.3692 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): 0.922
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,GM12892,H1-Mesenchymal,H1-Mesendoderm,Olfactory,GM19239,HEK293T,MCF-7,GM12891,GM12878,K-562,HFFc6,HeLa-S3,SU-DHL-2,H9-hESC,Liver,H1-hESC,MSLCL,NaiveB,GM19240,HUES64,SU-DHL-4,Skin-Fibroblast,HFF-hTERT,HAP1

Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET

Cohesin-loop study: 4DNFI8649RQJ, 4DNFIWZEN3FF, GSE43070, 4DNFIE8E4ANZ, GSE108787, GSE120294, GSE84022, 4DNFI7H4II2V, 4DNFIW8TIFI5, ENCSR732QOH, 4DNFIBM714BP, 4DNFIRKGMZRQ, ENCSR981FNA, 4DNFIV239W4L, GSE97394, ENCSR452NHL, GSE80820, ENCSR128RPG, 4DNFI9YAVTI1, GSE52457, 4DNFI3A3VYWU, ENCSR658RQQ, ENCSR312TUD, ENCSR299VMZ, Direct, ENCSR479MTN, 4DNFI6XD6JAQ, 4DNFISPUVQHA, 4DNFII84FBKM, GSE44267, 4DNFIOCW5AEM, 4DNFIPAF4PYT, 4DNFIQVMVRP6, GSE48592, 4DNFI9ZWZ5BS, 4DNFIVJ3IIQL, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, GSE105028, 4DNFIDBIEXI7, 4DNFIZGCA8AH, GSE58752, ENCSR033GUP

Cohesin-loop subunit: SMC1,Other,Rad21

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence: CordBlood

Cohesin-DEGs, number of studies: 1

Cohesin-DEGs, study: GSE73224

Cohesin-DEGs, subunit: Rad21

eachgene

Deatailed information for gene ENSG00000234883