Deatailed information for gene ENSG00000235514
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00032861
- Gene Symbol: LLPHP2
- Ensembl ID: ENSG00000235514
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Gene locus: chr21:25762937-25763333
Strand: -
- Gene type: processed_pseudogene
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.1874
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.909
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: RT-112,H1-hESC,HFF-hTERT,HeLa-S3,H9-hESC
- Related loop:
chr21:25575000-25600000~~chr21:25750000-25775000,
chr21:25600000-25625000~~chr21:25750000-25775000,
chr21:25750000-25775000~~chr21:25850000-25875000,
chr21:25750000-25775000~~chr21:25950000-25975000,
chr21:25750000-25775000~~chr21:26150000-26175000,
chr21:25750000-25775000~~chr21:26400000-26425000,
chr21:25750000-25775000~~chr21:26450000-26475000,
chr21:25750000-25775000~~chr21:26525000-26550000,
chr21:25750000-25775000~~chr21:29050000-29075000,
- Cohesin-loop type: HiC
- Cohesin-loop study:
4DNFIE8T8JZ8, 4DNFI8649RQJ, 4DNFI3CFMRID, 4DNFIVJ3IIQL, 4DNFIDJ2JZ7Q, 4DNFISPUVQHA, 4DNFIE8E4ANZ, GSE105028, GSE155380, 4DNFIV239W4L, 4DNFIW8TIFI5
- Cohesin-loop subunit: Other
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .