Deatailed information for gene ENSG00000240432
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00035508
- Gene Symbol: KRTAP13-3
- Ensembl ID: ENSG00000240432
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Gene locus: chr21:30425264-30425968
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.0368
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: RT-112,K-562,H1-hESC,CC-2551,H9-hESC,HUES64
- Related loop:
chr21:29375000-29400000~~chr21:30425000-30450000,
chr21:29925000-29950000~~chr21:30400000-30425000,
chr21:30025000-30050000~~chr21:30400000-30425000,
chr21:30050000-30075000~~chr21:30400000-30425000,
chr21:30250000-30275000~~chr21:30400000-30425000,
chr21:30325000-30350000~~chr21:30425000-30450000,
chr21:30425000-30450000~~chr21:31075000-31100000,
chr21:30425000-30450000~~chr21:31600000-31625000,
- Cohesin-loop type: HiChIP,HiC,Direct
- Cohesin-loop study:
4DNFIMEG1QIC, 4DNFIREVU1Z5, Direct, GSE105028, GSE120294, GSE155380, ENCSR545YBD, GSE97394
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .