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Basic information

CohesinDB ID: CDBG00040480

Gene Symbol: RNU6-1150P

Ensembl ID: ENSG00000252606

Gene locus: chr21:43996321-43996420 Strand: -

Gene type: snRNA

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.1063 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,MB157,H1-Mesenchymal,Olfactory,HEK293T,GM12878,K-562,A-549,HFFc6,HeLa-S3,H9-hESC,iPSC,Liver,H1-hESC,HCC1599,Motor-Neuron,CyT49-hESC,RT-112,CyT49-endoderm,HFF-hTERT,HAP1

Cohesin-loop type: HiChIP,HiC,Direct

Cohesin-loop study: ENCSR662QKG, GSE95015, 4DNFIWZEN3FF, GSE43070, 4DNFI6CWNUFL, 4DNFIMROE6N4, 4DNFITUOMFUQ, 4DNFIE8E4ANZ, ENCSR499RVD, 4DNFI5SUHCGZ, ENCSR545YBD, GSE120294, 4DNFIPV5KFMK, ENCSR410MDC, ENCSR866FWQ, 4DNFI6EIFUZI, 4DNFIA6NSSBJ, 4DNFIKYXMF1E, 4DNFIFHU75I5, 4DNFIYD8LO9Z, GSE155380, 4DNFICEGAHRC, 4DNFI1E6NJQJ, GSE52457, 4DNFIJ5DQZVK, 4DNFIM2BMJ33, 4DNFIX4PJKXZ, Direct, 4DNFIYDBBSE3, 4DNFI1UEG1HD, GSE116872, 4DNFIEJEFCAM, ENCSR244BBG, 4DNFIZF1KI43, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, 4DNFIC3HAU11, 4DNFIDKJFK2S, GSE105028, 4DNFIDBIEXI7, GSE58752, GSE116869, 4DNFII84FBKM, 4DNFIVSCH2CH

Cohesin-loop subunit: SMC1,Other,Rad21

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

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Deatailed information for gene ENSG00000252606