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Basic information

CohesinDB ID: CDBG00050650

Gene Symbol: DPRXP5

Ensembl ID: ENSG00000270652

Gene locus: chr21:36943266-36944125 Strand: +

Gene type: processed_pseudogene

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.0564 FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,Keratinocytes192627,Olfactory,MCF-7,GM12891,GM12878,K-562,A-549,CyT49-pancreatic,HFFc6,HeLa-S3,SU-DHL-2,H9-hESC,OCI-AML-3,HCT-116,Hep-G2,H1-hESC,HCC1599,HT-1376,Motor-Neuron,MSLCL,HUES64,SU-DHL-4,HUVEC,RT-112,CC-2551,HFF-hTERT,HAP1,MCF7-FASR

Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET

Cohesin-loop study: 4DNFI8649RQJ, ENCSR662QKG, GSE95015, ENCSR194SRI, 4DNFI6CWNUFL, GSE94872, 4DNFIMROE6N4, GSE118716, ENCSR499RVD, ENCSR794RDS, 4DNFIBN9K4V9, GSE120294, ENCSR852KQC, 4DNFIDSWKFF5, 4DNFIZ4F74QR, 4DNFIW8TIFI5, 4DNFIMEG1QIC, 4DNFIEYQ5ZIR, 4DNFIA6NSSBJ, 4DNFIYD8LO9Z, GSE111537, GSE155380, 4DNFICSTCJQZ, GSE97394, 4DNFICEGAHRC, ENCSR587DSF, ENCSR452NHL, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, ENCSR128RPG, 4DNFI9YAVTI1, 4DNFIL9M97T2, ENCSR550JLK, 4DNFI3A3VYWU, GSE80820, ENCSR658RQQ, ENCSR299VMZ, Direct, 4DNFISPUVQHA, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFI8Y9SRP2, ENCSR379CII, GSE101921, 4DNFIK61ILGM, 4DNFIYIAUEPW, 4DNFIEJEFCAM, ENCSR244BBG, GSE116872, ENCSR393LOP, 4DNFI9815EEJ, 4DNFIAWVDQ8C, 4DNFIOCW5AEM, ENCSR305RTT, ENCSR255XYX, 4DNFI7XAZNNQ, ENCSR933UZH, 4DNFIFLJLIS5, 4DNFIDZT7PR8, GSE105028, 4DNFIH7TH4MF

Cohesin-loop subunit: SMC1,CTCF,Other,Rad21

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

eachgene

Deatailed information for gene ENSG00000270652