Deatailed information for gene ENSG00000275523
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00053318
- Gene Symbol: MIR6508
- Ensembl ID: ENSG00000275523
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Gene locus: chr21:39447009-39447069
Strand: +
- Gene type: miRNA
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.0140
FDR = 0.0734
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: HEK293T,K-562,H1-hESC,Jurkat,HFF-hTERT,HAP1,MCF7-FASR,HeLa-S3,U-937,H9-hESC,SU-DHL-4
- Related loop:
chr21:38504739-38507562~~chr21:39440834-39442538,
chr21:38525000-38550000~~chr21:39450000-39475000,
chr21:38800000-38825000~~chr21:39425000-39450000,
chr21:39000000-39025000~~chr21:39425000-39450000,
chr21:39152734-39154644~~chr21:39445170-39446634,
chr21:39175000-39200000~~chr21:39425000-39450000,
chr21:39200000-39225000~~chr21:39425000-39450000,
chr21:39225000-39250000~~chr21:39425000-39450000,
chr21:39300000-39325000~~chr21:39425000-39450000,
chr21:39325000-39350000~~chr21:39425000-39450000,
- Cohesin-loop type: HiC,Direct,ChIAPET
- Cohesin-loop study:
GSE44267, 4DNFI3CFMRID, 4DNFIPAF4PYT, 4DNFI3A3VYWU, 4DNFIP25GZGA, 4DNFIQVMVRP6, ENCSR658RQQ, Direct, GSE165038, GSE118716, 4DNFIDKJFK2S, 4DNFISPUVQHA, GSE105028, 4DNFI8Y9SRP2, 4DNFIB7QTIMH, 4DNFIBN9K4V9, 4DNFIDBIEXI7, ENCSR361AYD, 4DNFIV239W4L, 4DNFI7H4II2V
- Cohesin-loop subunit: Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .