Deatailed information for gene ENSG00000276633
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00053847
- Gene Symbol: AJ011931.1
- Ensembl ID: ENSG00000276633
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Gene locus: chr21:45870853-45873345
Strand: +
- Gene type: lncRNA
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.2628
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.795
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: K-562,H1-hESC,HFF-hTERT,HFFc6,HeLa-S3,H9-hESC
- Related loop:
chr21:44925000-44950000~~chr21:45850000-45875000,
chr21:45125000-45150000~~chr21:45875000-45900000,
chr21:45325000-45350000~~chr21:45875000-45900000,
chr21:45450000-45475000~~chr21:45850000-45875000,
chr21:45550000-45575000~~chr21:45875000-45900000,
chr21:45675000-45700000~~chr21:45875000-45900000,
chr21:45725000-45750000~~chr21:45875000-45900000,
chr21:45750000-45775000~~chr21:45875000-45900000,
chr21:45875000-45900000~~chr21:46050000-46075000,
- Cohesin-loop type: HiC,Direct
- Cohesin-loop study:
4DNFI8649RQJ, 4DNFIBM714BP, 4DNFIWZEN3FF, 4DNFIM2BMJ33, 4DNFI6CWNUFL, 4DNFI6XD6JAQ, Direct, 4DNFIDJ2JZ7Q, 4DNFIBY3UHJB, GSE105028, 4DNFIDBIEXI7, 4DNFI5SUHCGZ
- Cohesin-loop subunit: Other
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .