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Basic information

CohesinDB ID: CDBG00054747

Gene Symbol: MIR6070

Ensembl ID: ENSG00000278433

Gene locus: chr21:43609886-43609989 Strand: -

Gene type: miRNA

Double-evidenced cohesin related CRMs

Whether cohesin-related CRMs (double-evidenced): False

All evidenced type: Interaction

Regulatory cohesin (double-evidenced):

Co-expression with cohesin genes Rho = 0.0232 FDR = 0.0027
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)

Tissue specificity

Gene expression across tissues (TPM):

Tissue specificity of gene (Gini-coefficient): -0.000
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60

Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90

Cohesin-loop evidence

Whether has cohesin-loop: True

Involved cell types for loop evidence: IMR-90,MCF-10A,TAMR-MCF7,MB157,Aorta,MCF-7,HEK293T,GM12891,GM12878,K-562,HFFc6,PAEC,HeLa-S3,H9-hESC,iPSC,REC-1,OCI-AML-3,HCT-116,H1-hESC,Motor-Neuron,GM19238,MSLCL,U-937,SU-DHL-4,HUVEC,HL-60,RT-112,KBM-7,CyT49-Gut,CC-2551,HAP1,HFF-hTERT,MCF7-FASR

Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET

Cohesin-loop study: 4DNFIH2A7IKF, 4DNFIQYQWPF5, GSE95015, 4DNFIHMCILEN, GSE116875, 4DNFI5CGQ46V, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, GSE118716, GSE116869, GSE120294, ENCSR545YBD, 4DNFIDSWKFF5, 4DNFIILDWK8M, 4DNFIMEG1QIC, 4DNFIXU2KPNQ, GSE105028, 4DNFI9VXTBE2, 4DNFIBCIA62Q, 4DNFIYD8LO9Z, GSE99541, GSE111537, ENCSR668RDP, 4DNFI15FPSQL, GSE131580, GSE155380, ENCSR444BAR, ENCSR981FNA, ENCSR123UVP, ENCSR587DSF, ENCSR752QCX, ENCSR452NHL, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFIIMZB6Y9, 4DNFI9YAVTI1, 4DNFIJBJ6QVH, GSE80820, 4DNFI3A3VYWU, ENCSR637QCS, ENCSR658RQQ, ENCSR299VMZ, Direct, 4DNFIALNLR78, GSE165038, 4DNFIBY3UHJB, 4DNFI1UEG1HD, GSE101921, 4DNFI8JFOAJT, 4DNFIQRTP7NM, GSE44267, 4DNFIC3HAU11, GSE48592, ENCSR338WUS, ENCSR527RXH, 4DNFIFLJLIS5, 4DNFILIM6FDL, 4DNFIDZT7PR8, 4DNFINEQY95T, 4DNFIP71EWXC, 4DNFIQ2687RT, 4DNFIBKZK63V, 4DNFIH7TH4MF, 4DNFIZGCA8AH, GSE58752, 4DNFII84FBKM, 4DNFIT96Z365, 4DNFIVSCH2CH

Cohesin-loop subunit: SMC1,CTCF,Other,Rad21

Cohesin-DEGs evidence

Whether cohesin DEGs: False

Involved cell types for DEG evidence:

Cohesin-DEGs, number of studies: 0

Cohesin-DEGs, study: .

Cohesin-DEGs, subunit: .

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Deatailed information for gene ENSG00000278433