Deatailed information for gene ENSG00000279864
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00055784
- Gene Symbol: NCOR1P4
- Ensembl ID: ENSG00000279864
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Gene locus: chr21:9529933-9559268
Strand: +
- Gene type: transcribed_processed_pseudogene
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): False
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
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Co-expression with cohesin genes Rho = 0.1190
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
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Gene expression across tissues (TPM):
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Tissue specificity of gene (Gini-coefficient): 0.981
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
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Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
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Involved cell types for loop evidence: HL-60,HCT-116,CyT49-endoderm,Hep-G2,H9-hESC
- Related loop:
chr21:5225000-5250000~~chr21:9550000-9575000,
chr21:7250000-7275000~~chr21:9550000-9575000,
chr21:7950000-7975000~~chr21:9525000-9550000,
chr21:9525000-9550000~~chr21:9650000-9675000,
chr21:9550000-9575000~~chr21:9650000-9675000,
chr21:9550000-9575000~~chr21:9750000-9775000,
- Cohesin-loop type: HiC,Direct
- Cohesin-loop study:
4DNFII6AN691, Direct, 4DNFIP71EWXC, GSE105028, 4DNFILIM6FDL, 4DNFIYDBBSE3, GSE131580, 4DNFICSTCJQZ
- Cohesin-loop subunit: Other
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
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Involved cell types for DEG evidence:
- Cohesin-DEGs, number of studies: 0
- Cohesin-DEGs, study: .
- Cohesin-DEGs, subunit: .