Deatailed information for gene ENSG00000280372

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  • Basic information
  • CohesinDB ID: CDBG00056176
  • Gene Symbol: CR382285.2
  • Ensembl ID: ENSG00000280372
  • Gene locus: chr21:10028360-10029855 Strand: -
  • Gene type: TEC
  • Double-evidenced cohesin related CRMs
  • Whether cohesin-related CRMs (double-evidenced): False
  • All evidenced type: Interaction
  • Regulatory cohesin (double-evidenced):
  • Co-expression with cohesin genes Rho = 0.1023 FDR = 0.0000
    (Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
  • Tissue specificity
  • Gene expression across tissues (TPM):
  • Tissue specificity of gene (Gini-coefficient): 0.981
    0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
  • Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): nan
    0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
  • Cohesin-loop evidence
  • Whether has cohesin-loop: True
  • Involved cell types for loop evidence: GM12878,CyT49-endoderm,H1-hESC,CyT49-Gut,CyT49-pancreatic,HFFc6,HeLa-S3,H9-hESC,CyT49-hESC
  • Related loop: chr21:10000000-10025000~~chr21:10100000-10125000, chr21:10000000-10025000~~chr21:10325000-10350000, chr21:10000000-10025000~~chr21:10625000-10650000, chr21:10000000-10025000~~chr21:10750000-10775000, chr21:5225000-5250000~~chr21:10000000-10025000, chr21:7950000-7975000~~chr21:10000000-10025000, chr21:9725000-9750000~~chr21:10000000-10025000, chr21:9750000-9775000~~chr21:10000000-10025000,
  • Cohesin-loop type: HiC,Direct
  • Cohesin-loop study: 4DNFI9815EEJ, 4DNFIQYQWPF5, 4DNFIM2BMJ33, 4DNFIKYXMF1E, Direct, 4DNFIMROE6N4, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFINEQY95T, 4DNFIYDBBSE3, 4DNFI1UEG1HD, 4DNFI5SUHCGZ, 4DNFIJWBWE41, 4DNFIEJEFCAM, 4DNFII84FBKM, 4DNFIIMZB6Y9
  • Cohesin-loop subunit: Other
  • Cohesin-DEGs evidence
  • Whether cohesin DEGs: False
  • Involved cell types for DEG evidence:
  • Cohesin-DEGs, number of studies: 0
  • Cohesin-DEGs, study: .
  • Cohesin-DEGs, subunit: .
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