- Basic information
- CohesinDB ID: CDBP00412303
- Locus: chr21-7773919-7774703
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Data sourse: ENCSR000BLD, GSE72082, ENCSR000BSB, ENCSR000BLY, GSE105028, GSE103477, GSE131606, GSE25021, GSE108869, ENCSR000BTU, GSE67783, ENCSR000BKV, GSE86191, GSE120943, GSE106870, ENCSR000BLS, GSE206145, ENCSR000ECE, GSE97394, ENCSR167MTG, GSE110061, GSE129526, GSE111913, GSE38411, ENCSR054FKH, ENCSR153HNT, GSE83726, GSE50893, GSE131577
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Cell type: MDM, RH4, GM10847, GM2610, CVB-hiPSC, GM19240, H9-hESC, RPE, GM2630, Ishikawa, GM12890, HeLa-S3, BCBL-1, K-562, GM18486, DKO, GM18526, H1-hESC, SNYDER, Monocytes, GM12878, GM12891, GM2588, SK-N-SH, GM19239, RT-112, GM19193, HUES64, MCF-7, GM12892, HCT-116, HL-60, Hep-G2, GM19238, HSPC
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 14% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.611
- Subunit: SA1,Rad21,SA2,SMC1
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CTCF binding site: CTCF
CTCF motif: True
- Genomic location: TSS,TES
- 3D genome
- TAD boundary: non-Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: False
ChIA-PET loops: False
- Compartment:
50% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): False
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Chromatin annotation:
".": 100%,
"NotApplicable": 0%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: .
- Target gene symbol (double-evidenced CRMs): .
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 0
- Related genes and loops