- Basic information
- CohesinDB ID: CDBP00413233
- Locus: chr21-14362036-14362277
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Data sourse: ENCSR000EDE, ENCSR000ECS, ENCSR879KXD, GSE68388
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Cell type: K-562, HeLa-S3, HuCC-T1
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 1% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.967
- Subunit: SMC3,Rad21,SMC1
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CTCF binding site: non-CTCF
CTCF motif: False
- Genomic location: TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: False
ChIA-PET loops: True
- Compartment:
46% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): False
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Chromatin annotation:
"15_Quies": 75%,
"14_ReprPCWk": 12%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: FOSL1, MEIS2, XBP1, FOXA1, HLF, PBX2, ATF3, ATF4, MECOM, TP63, JMJD1C, TRIM28, ETV1, SNAI2, MLL, TP73, JUN, TCF12, EP300, TRIM24, SOX6, TEAD4, KMT2B, FOXA3, PDX1, NBN, ERG, HOXC5, MYC, SMARCA4, RAD21, GRHL3, STAT3, RCOR1, ARNTL, CEBPB, KMT2A, GRHL2, SPI1, EHF, IRF1, GATA2, ZNF644, EP400, NFIL3, RUNX1, CEBPA, HDAC1, ZNF534, CBX8, RUNX2, PBX4, ELK1, ATF2, FOS, CDK8, MED1, CEBPD, MYB, SMAD1, L3MBTL2, EVI1, STAT5A, BCL11A, ZBTB7A, ATF7, HOXA9, MLLT1, SKI, ZNF283, FOXA2, MEIS1, MEF2C, CDK9, HOXB13, ZNF318, KDM1A, RELA, JUNB, ZFP36, BATF, MGA, TAL1, MAX, CEBPG, KLF4, GFI1B, NR2F1, TP53, PKNOX1, NFKB1, ELF3, AR, RNF2, BRD4, JUND, CLOCK, IRF9, ZNF24
- Target gene symbol (double-evidenced CRMs): RBM11
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 0
- Related genes and loops