- Basic information
- CohesinDB ID: CDBP00413235
- Locus: chr21-14366465-14366972
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Data sourse: ENCSR153HNT
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Cell type: K-562
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 0% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.989
- Subunit: SA1
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CTCF binding site: CTCF
CTCF motif: False
- Genomic location: TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: False
ChIA-PET loops: True
- Compartment:
46% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): False
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Chromatin annotation:
"15_Quies": 81%,
"5_TxWk": 13%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: MAFG, NKX2-2, ZFX, CTBP1, MEIS2, MAFF, FOXA1, PBX2, ERG, RELA, ZEB2, IKZF1, CDK8, CEBPB, PKNOX1, C11orf30, EVI1, MAFK, SPI1, AR, PAX8, GATA2, RNF2, BRD4, CUX1, TEAD4, ZNF316
- Target gene symbol (double-evidenced CRMs): HSPA13,RBM11
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 6
- Related genes and loops