- Basic information
- CohesinDB ID: CDBP00416430
- Locus: chr21-30800989-30801830
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Data sourse: ENCSR198ZYJ, ENCSR404BPV
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Cell type: Neurons-H1
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 1% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.989
- Subunit: SMC3,Rad21
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CTCF binding site: non-CTCF
CTCF motif: False
- Genomic location: TSS,TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: True
ChIA-PET loops: True
- Compartment:
21% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): False
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Chromatin annotation:
"15_Quies": 92%,
"9_Het": 5%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: ZNF394, ZNF426, MAFG, ZNF697, MAFF, ZNF101, AEBP2, ZBTB21, HNRNPK, ZBTB8A, ZFP64, ZNF24, ARNT, GRHL3, PRDM12, ZNF781, ZNF518A, ZNF189, GABPA, CEBPG, CEBPB, ZNF629, ZNF558, ZXDB, ZBTB11, ZNF680, ZNF213, C11orf30, ZNF292, ZNF140, ZNF577, MAFK, EP300, ZNF664, ZNF202, REST, ZNF623, ZC3H11A, ZNF555, ZNF34
- Target gene symbol (double-evidenced CRMs): .
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 15
- Related genes and loops