- Basic information
- CohesinDB ID: CDBP00416677
- Locus: chr21-31651528-31651808
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Data sourse: ENCSR230ZWH
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Cell type: Liver
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 0% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.989
- Subunit: Rad21
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CTCF binding site: non-CTCF
CTCF motif: False
- Genomic location: TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: False
ChIA-PET loops: True
- Compartment:
67% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): True
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Chromatin annotation:
"15_Quies": 91%,
"5_TxWk": 4%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: SKI, BCL6, FOXA2, CEBPA, SOX13, FOXA1, HLF, SAP130, RXRB, RARA, EZH1, HOMEZ, RAD21, HIF1A, RXRA, ZNF48, SMAD4, TEAD3, ELF3, MIXL1, HNF4A, SOX5, GATA2, FOXP1, NFIL3, FOXA3, GATAD2A
- Target gene symbol (double-evidenced CRMs): .
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 1
- Related genes and loops