- Basic information
- CohesinDB ID: CDBP00417540
- Locus: chr21-33918896-33919235
-
Data sourse: ENCSR153HNT
-
Cell type: K-562
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 0% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.989
- Subunit: SA1
-
CTCF binding site: non-CTCF
CTCF motif: False
- Genomic location: TSS,TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
-
Hi-C loops: True
Hi-ChIP loops: True
ChIA-PET loops: True
- Compartment:
90% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): True
-
Chromatin annotation:
"15_Quies": 75%,
"14_ReprPCWk": 16%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
-
Co-bound Transcriptional factors: SNAI2, ZFX
- Target gene symbol (double-evidenced CRMs): AP000311.1,MRPS6,ATP5PO,ITSN1,SLC5A3,RUNX1,SON,CRYZL1,DONSON,RCAN1,SMIM11A,AP000295.1,IFNAR2
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 3
- Number of somatic mutations (non-coding): 3
- Related genes and loops
- Related gene:
ENSG00000249624,
ENSG00000159110,
ENSG00000159140,
ENSG00000159147,
ENSG00000249209,
ENSG00000205758,
ENSG00000205726,
ENSG00000241837,
ENSG00000243927,
ENSG00000198743,
ENSG00000205670,
ENSG00000159200,
ENSG00000159216,
- Related loop:
chr21:33200000-33225000~~chr21:33900000-33925000,
chr21:33550000-33575000~~chr21:33900000-33925000,
chr21:33575000-33600000~~chr21:33900000-33925000,
chr21:33600000-33625000~~chr21:33900000-33925000,
chr21:33650000-33675000~~chr21:33900000-33925000,
chr21:33675000-33700000~~chr21:33900000-33925000,
chr21:33700000-33725000~~chr21:33900000-33925000,
chr21:33750000-33775000~~chr21:33900000-33925000,
chr21:33900000-33925000~~chr21:34050000-34075000,
chr21:33900000-33925000~~chr21:34075000-34100000,
chr21:33900000-33925000~~chr21:34100000-34125000,
chr21:33900000-33925000~~chr21:34175000-34200000,
chr21:33900000-33925000~~chr21:34200000-34225000,
chr21:33900000-33925000~~chr21:34225000-34250000,
chr21:33900000-33925000~~chr21:34250000-34275000,
chr21:33900000-33925000~~chr21:34325000-34350000,
chr21:33900000-33925000~~chr21:34350000-34375000,
chr21:33900000-33925000~~chr21:34500000-34525000,
chr21:33900000-33925000~~chr21:34525000-34550000,
chr21:33900000-33925000~~chr21:34600000-34625000,
chr21:33900000-33925000~~chr21:34625000-34650000,
chr21:33900000-33925000~~chr21:34875000-34900000,
chr21:33900000-33925000~~chr21:36025000-36050000,
chr21:33914721-33916686~~chr21:34347220-34348816,
chr21:33914796-33916595~~chr21:34351238-34352674,
chr21:33914900-33916542~~chr21:34347151-34348865,
chr21:33915150-33916451~~chr21:34347188-34348864,
chr21:33922474-33925874~~chr21:34242616-34244890,
chr21:33922474-33925874~~chr21:34334528-34336154,
chr21:33922474-33925874~~chr21:34347201-34348842,
chr21:33922474-33925874~~chr21:34350903-34352912,
chr21:33922474-33925874~~chr21:34361152-34363316,
chr21:33922478-33925703~~chr21:34242552-34244759,
chr21:33922478-33925703~~chr21:34347178-34348870,
chr21:33922478-33925703~~chr21:34350953-34352703,
chr21:33922482-33925641~~chr21:34242769-34244742,
chr21:33922482-33925641~~chr21:34347190-34348909,
chr21:33922482-33925641~~chr21:34351260-34352734,
chr21:33922485-33925689~~chr21:34242598-34244771,
chr21:33922485-33925689~~chr21:34347190-34348835,
chr21:33922485-33925689~~chr21:34350945-34352862,
chr21:33922491-33925917~~chr21:34200938-34203575,
chr21:33922491-33925917~~chr21:34242559-34244950,
chr21:33922491-33925917~~chr21:34347170-34348852,
chr21:33922491-33925917~~chr21:34350938-34352700,
chr21:33922497-33925632~~chr21:34200972-34203070,
chr21:33922497-33925632~~chr21:34242565-34244736,
chr21:33922497-33925632~~chr21:34347223-34348899,
chr21:33922497-33925632~~chr21:34350970-34352701,
chr21:33922506-33925702~~chr21:34231067-34232322,
chr21:33922506-33925702~~chr21:34243018-34244439,
chr21:33922506-33925702~~chr21:34347170-34348764,
chr21:33922506-33925702~~chr21:34351099-34352751,
chr21:33922506-33925702~~chr21:34361196-34363023,
chr21:33922548-33925984~~chr21:34347119-34348821,
chr21:33922548-33925984~~chr21:34351060-34352696,
chr21:33922677-33925654~~chr21:34108278-34109481,
chr21:33922677-33925654~~chr21:34242517-34244715,
chr21:33922677-33925654~~chr21:34347167-34348827,
chr21:33922677-33925654~~chr21:34351004-34352678,
chr21:33922678-33925692~~chr21:34230884-34232496,
chr21:33922678-33925692~~chr21:34242813-34244834,
chr21:33922678-33925692~~chr21:34347169-34348885,
chr21:33922678-33925692~~chr21:34350968-34352861,
chr21:33922678-33925692~~chr21:34360488-34363116,
chr21:33922723-33925649~~chr21:34201110-34202883,
chr21:33922723-33925649~~chr21:34242578-34244694,
chr21:33922723-33925649~~chr21:34347391-34348852,
chr21:33922723-33925649~~chr21:34351297-34352672,
chr21:33922723-33925649~~chr21:34361210-34363114,
chr21:33922731-33925983~~chr21:34242565-34244760,
chr21:33922731-33925983~~chr21:34347158-34348864,
chr21:33922731-33925983~~chr21:34350999-34352701,
chr21:33922747-33925710~~chr21:34200971-34203170,
chr21:33922747-33925710~~chr21:34347181-34348879,
chr21:33922747-33925710~~chr21:34350953-34352933,
chr21:33922754-33925647~~chr21:34347210-34348841,
chr21:33922769-33925566~~chr21:34347241-34348855,
chr21:33922769-33925566~~chr21:34351244-34352677,
chr21:33922774-33925646~~chr21:34243082-34244282,
chr21:33922774-33925646~~chr21:34347428-34348867,
chr21:33922774-33925646~~chr21:34350864-34352907,
chr21:33922774-33925646~~chr21:34360816-34363118,
chr21:33922793-33925695~~chr21:34347215-34348903,
chr21:33922793-33925695~~chr21:34350960-34352688,
chr21:33922794-33925655~~chr21:34072307-34075130,
chr21:33922794-33925655~~chr21:34201154-34203236,
chr21:33922794-33925655~~chr21:34242558-34244863,
chr21:33922794-33925655~~chr21:34347200-34348863,
chr21:33922794-33925655~~chr21:34351015-34352657,
chr21:33922795-33925611~~chr21:34201401-34202935,
chr21:33922795-33925611~~chr21:34243084-34244434,
chr21:33922795-33925611~~chr21:34347197-34348834,
chr21:33922795-33925611~~chr21:34351279-34352654,
chr21:33922795-33925867~~chr21:34242537-34244933,
chr21:33922795-33925867~~chr21:34347175-34348883,
chr21:33922795-33925867~~chr21:34350963-34352941,
chr21:33922799-33925652~~chr21:34072055-34075610,
chr21:33922799-33925652~~chr21:34347293-34348845,
chr21:33922799-33925652~~chr21:34350835-34352930,
chr21:33922803-33925652~~chr21:34230934-34232390,
chr21:33922803-33925652~~chr21:34243116-34244483,
chr21:33922803-33925652~~chr21:34347392-34348882,
chr21:33922803-33925652~~chr21:34351268-34352724,
chr21:33922807-33925639~~chr21:34018905-34021636,
chr21:33922807-33925639~~chr21:34230926-34232381,
chr21:33922807-33925639~~chr21:34242597-34244750,
chr21:33922807-33925639~~chr21:34347146-34348894,
chr21:33922807-33925639~~chr21:34351249-34352739,
chr21:33922807-33925639~~chr21:34360481-34363035,
chr21:33922811-33925629~~chr21:34242516-34244705,
chr21:33922811-33925629~~chr21:34347145-34348885,
chr21:33922811-33925629~~chr21:34350998-34352677,
chr21:33922829-33925686~~chr21:34201098-34202995,
chr21:33922829-33925686~~chr21:34242574-34244710,
chr21:33922829-33925686~~chr21:34347151-34348865,
chr21:33922829-33925686~~chr21:34351316-34352521,
chr21:33922904-33925886~~chr21:34242518-34244755,
chr21:33922904-33925886~~chr21:34347187-34348858,
chr21:33922904-33925886~~chr21:34350957-34352717,
chr21:33923095-33925670~~chr21:34201035-34203141,
chr21:33923095-33925670~~chr21:34242647-34244858,
chr21:33923095-33925670~~chr21:34347260-34348894,
chr21:33923095-33925670~~chr21:34351032-34352705,
chr21:33923111-33925648~~chr21:34347155-34348864,
chr21:33923111-33925648~~chr21:34351277-34352706,
chr21:33923118-33925272~~chr21:34351281-34352636,
chr21:33923120-33925433~~chr21:34072467-34075245,
chr21:33923120-33925433~~chr21:34201133-34203155,
chr21:33923120-33925433~~chr21:34242660-34244787,
chr21:33923120-33925433~~chr21:34347170-34348883,
chr21:33923120-33925433~~chr21:34351250-34352682,
chr21:33923122-33925635~~chr21:34029665-34030911,
chr21:33923122-33925635~~chr21:34201046-34202955,
chr21:33923122-33925635~~chr21:34242849-34244739,
chr21:33923122-33925635~~chr21:34347205-34348811,
chr21:33923122-33925635~~chr21:34351299-34352659,
chr21:33923122-33925657~~chr21:34242859-34244409,
chr21:33923122-33925657~~chr21:34347222-34348883,
chr21:33923122-33925657~~chr21:34351282-34352634,
chr21:33923122-33925676~~chr21:34201509-34202753,
chr21:33923122-33925676~~chr21:34243033-34244588,
chr21:33923122-33925676~~chr21:34347225-34348729,
chr21:33923122-33925676~~chr21:34351224-34352662,
chr21:33923143-33925876~~chr21:34201024-34203002,
chr21:33923143-33925876~~chr21:34242626-34244598,
chr21:33923143-33925876~~chr21:34347195-34348845,
chr21:33923144-33925455~~chr21:34072248-34074599,
chr21:33923144-33925455~~chr21:34200887-34202910,
chr21:33923144-33925455~~chr21:34243074-34244709,
chr21:33923144-33925455~~chr21:34347211-34348885,
chr21:33923144-33925455~~chr21:34351317-34352666,
chr21:33923159-33925198~~chr21:34347399-34348854,
chr21:33923159-33925198~~chr21:34350968-34352744,
chr21:33923160-33925641~~chr21:34242525-34244685,
chr21:33923160-33925641~~chr21:34347152-34348883,
chr21:33923160-33925641~~chr21:34350950-34352712,
chr21:33923163-33925652~~chr21:34019312-34021390,
chr21:33923163-33925652~~chr21:34230928-34232534,
chr21:33923163-33925652~~chr21:34242624-34244691,
chr21:33923163-33925652~~chr21:34347210-34348885,
chr21:33923163-33925652~~chr21:34351238-34352674,
chr21:33923165-33925484~~chr21:34347236-34348799,
chr21:33923165-33925484~~chr21:34351203-34352904,
chr21:33923166-33925650~~chr21:34347188-34348864,
chr21:33923167-33925446~~chr21:34243125-34244618,
chr21:33923167-33925446~~chr21:34347227-34348815,
chr21:33923167-33925446~~chr21:34351265-34352679,
chr21:33923179-33925760~~chr21:34347132-34348816,
chr21:33923181-33925620~~chr21:34242939-34244436,
chr21:33923181-33925620~~chr21:34347248-34348899,
chr21:33923182-33925354~~chr21:34350993-34352702,
chr21:33923185-33925313~~chr21:34242635-34244717,
chr21:33923185-33925313~~chr21:34347200-34348835,
chr21:33923185-33925313~~chr21:34351263-34352734,
chr21:33923186-33925791~~chr21:34242603-34244424,
chr21:33923186-33925791~~chr21:34347445-34348815,
chr21:33923186-33925791~~chr21:34351258-34352706,
chr21:33923188-33925377~~chr21:34072259-34075558,
chr21:33923188-33925377~~chr21:34201102-34203387,
chr21:33923188-33925377~~chr21:34243095-34244510,
chr21:33923188-33925377~~chr21:34347220-34348816,
chr21:33923188-33925377~~chr21:34351052-34352697,
chr21:33923188-33925626~~chr21:34242831-34244481,
chr21:33923188-33925626~~chr21:34347240-34348831,
chr21:33923188-33925626~~chr21:34351053-34352749,
chr21:33923188-33925626~~chr21:34361201-34363001,
chr21:33923203-33925479~~chr21:34242612-34244684,
chr21:33923203-33925479~~chr21:34351078-34352698,
chr21:33923225-33925528~~chr21:34347216-34348815,
chr21:33923225-33925528~~chr21:34351176-34352652,
chr21:33923267-33925674~~chr21:34201419-34202832,
chr21:33923267-33925674~~chr21:34243002-34244459,
chr21:33923267-33925674~~chr21:34347297-34349084,
chr21:33923267-33925674~~chr21:34351237-34352679,
chr21:33923268-33925281~~chr21:34351254-34352712,
chr21:33923273-33925677~~chr21:34018536-34021454,
chr21:33923273-33925677~~chr21:34201261-34203165,
chr21:33923273-33925677~~chr21:34231086-34232306,
chr21:33923273-33925677~~chr21:34242680-34244482,
chr21:33923273-33925677~~chr21:34347284-34348765,
chr21:33923273-33925677~~chr21:34351214-34352694,
chr21:33923297-33925666~~chr21:34243033-34244434,
chr21:33923297-33925666~~chr21:34347324-34348725,
chr21:33923297-33925666~~chr21:34351254-34352629,
chr21:33923337-33925670~~chr21:34347311-34348720,
chr21:33923337-33925670~~chr21:34351266-34352642,
chr21:33923351-33925672~~chr21:34231078-34232324,
chr21:33923351-33925672~~chr21:34243120-34244473,
chr21:33923351-33925672~~chr21:34347307-34348721,
chr21:33923351-33925672~~chr21:34351295-34352620,
chr21:33923354-33925674~~chr21:34347309-34348720,
chr21:33923354-33925674~~chr21:34351230-34352630,
chr21:33923355-33925607~~chr21:34243041-34244462,
chr21:33923355-33925607~~chr21:34347336-34348747,
chr21:33923355-33925607~~chr21:34351298-34352601,
chr21:33923364-33925673~~chr21:34347314-34348702,
chr21:33923364-33925673~~chr21:34351290-34352549,
chr21:33923428-33925646~~chr21:34243111-34244377,
chr21:33923517-33925311~~chr21:34347480-34348692,
chr21:7750000-7775000~~chr21:33900000-33925000,
chr21:7800000-7825000~~chr21:33900000-33925000,