- Basic information
- CohesinDB ID: CDBP00418102
- Locus: chr21-35468570-35469988
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Data sourse: ENCSR000BLD, GSE67783, GSE105028, GSE206145-NatGen2015, ENCSR153HNT
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Cell type: H1-hESC, Fibroblast, K-562, HSPC, H9-hESC
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 2% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.944
- Subunit: Mau2,SA1,Rad21,SA2
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CTCF binding site: non-CTCF
CTCF motif: False
- Genomic location: TSS,TES
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: True
ChIA-PET loops: True
- Compartment:
81% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): True
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Chromatin annotation:
"15_Quies": 70%,
"7_Enh": 14%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: AR, NR3C1, HDAC2, GATA2, RUNX2, TRIM28, GATA4, ZNF3, GRHL3, ZSCAN5A, MYOD1, TEAD4
- Target gene symbol (double-evidenced CRMs): CLIC6
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 10
- Related genes and loops