CohesinDB_Data

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ChET SMC3ac CHOP Bladder Cell-line

Modules

890 Cohesin-Binding 546 Cohesin-3Dgenome 535 Cohesin-DEGs

Assay

890 ChIPseq 385 HiC 282 RNAseq 225 Microarray 119 ChIAPET 42 HiChIP 16 PROseq 12 GROseq

Cohesin Subunit

453 Rad21 385 NULL 257 CTCF 165 Input 156 NIPBL 133 SA2 117 SMC1 110 SA1 97 SMC3 42 AFF4 16 WAPL 14 SMC3ac 11 Mau2 8 Other 6 ESCO1 1 ESCO2

Disease

1028 Cancer 811 Normal 94 CdLS 36 CHOP 2 SARS-Cov2

Tissues

619 Blood 211 Breast 164 Cervix 153 Colon 153 Lung 114 Skin 110 Embryo 76 Neural 47 Liver 45 Retina 36 Kidney 34 Brain 29 Bladder 27 iPSC-derive 19 Bone 19 Cortex 19 Renal 19 Stem-cell 13 foreskin 12 Umbilical-cord 12 Lymph 6 Epithelial 6 Prostate 5 Artery 4 Stomach 3 Ovary 2 Thyroid 2 Pancreas 2 Heart 2 Tonsils 2 Uterus 1 Gut 1 Intestine 1 Spleen 1 Muscle 1 Thymus 1 Adrenal

Biosamples

1372 Cell-line 581 Primary 18 Tissue

ID	Assay	Related subunit	Celltype	Tissue	Disease	Treatment1	Treatment2	Study	Download1	Download2