CohesinDB_Data

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RNAseq CTCF Cancer Breast Primary

Modules

962 Cohesin-Binding 546 Cohesin-3Dgenome 535 Cohesin-DEGs

Assay

962 ChIPseq 385 HiC 282 RNAseq 225 Microarray 119 ChIAPET 42 HiChIP 16 PROseq 12 GROseq

Cohesin Subunit

463 Rad21 259 CTCF 176 NIPBL 166 Input 143 SA2 117 SMC1 112 SA1 97 SMC3 53 AFF4 27 Mau2 16 WAPL 14 SMC3ac 8 Other 6 ESCO1 1 ESCO2

Disease

1035 Cancer 859 Normal 105 CdLS 42 CHOP 2 SARS-Cov2

Tissues

622 Blood 218 Breast 164 Cervix 153 Colon 153 Lung 133 Skin 110 Embryo 76 Neural 74 Retina 50 Kidney 47 Liver 34 Brain 29 Bladder 27 iPSC-derive 19 Renal 19 Bone 19 Stem-cell 19 Cortex 13 foreskin 12 Umbilical-cord 12 Lymph 6 Epithelial 6 Prostate 5 Artery 4 Stomach 3 Ovary 2 Pancreas 2 Uterus 2 Tonsils 2 Heart 2 Thyroid 1 Spleen 1 Muscle 1 Adrenal 1 Intestine 1 Gut 1 Thymus

Biosamples

1422 Cell-line 603 Primary 18 Tissue

ID	Assay	Related subunit	Celltype	Tissue	Disease	Treatment1	Treatment2	Study	Download1	Download2