Detailed information for processed data CDBD01450

  • Basic information
  • CohesinDB ID: CDBD01450
  • Cohesin-related type: Cohesin-3Dgenome
  • NGS assay: HiChIP
  • Involved cohesin subunit: SMC1
  • Sample information
  • Cell type: HCC1599
  • Tissue type: Breast
  • Biosample: Cell-line
  • Disease: Cancer
  • Treatment 1: NT
  • Treatment 2: NT
  • Assay-specific information
  • Antibody (for ChIP-seq,ChIA-PET): SMC1
  • Restriction enzyme (for Hi-C, Hi-ChIP): None
  • Comparison group (for RNA-seq, Microarray, etc.): None
  • Downloadable file (Check format description)
  • Original study: GSE116872
  • Process file 1: HiChIP_GSE116872_HCC1599_SMC1_NT_NT_rep0.hic
  • Process file 2: HiChIP_GSE116872_HCC1599_SMC1_NT_NT_rep0.loop