- Basic information
- CohesinDB ID: CDBP00415528
- Locus: chr21-26632886-26633405
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Data sourse: ENCSR000BLD, GSE67783, ENCSR153HNT, GSE86191
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Cell type: K-562, H1-hESC, HCT-116, HSPC
- DNA Sequence of binding site:
UCSC hg38
- Cohesin category
- Peak occupancy ratio: 1% samples have this site.
- Cell specificity (0: conserved, 1: cell type specific): 0.956
- Subunit: SA1,Rad21
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CTCF binding site: CTCF
CTCF motif: False
- Genomic location: Intergenic
- 3D genome
- TAD boundary: Boundary
- Chromatin hubs: Hub
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Hi-C loops: True
Hi-ChIP loops: False
ChIA-PET loops: True
- Compartment:
42% Hi-C samples shows Compartment A
- Cis-regulatory elements
- Enhancer (Fantom5): non-Enhancer
- Super enhancer (SEdb): False
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Chromatin annotation:
"15_Quies": 57%,
"9_Het": 39%,
Note: The percentage represent how many of the 127 Roadmap datasets show the indicated state (top 2).
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Co-bound Transcriptional factors: FOXO1, POU2F2, CHD8, CBFA2T2, FOXA2, TBL1X, MYCN, BRF2, POU5F1, ZFX, POU4F2, XBP1, GTF2B, WT1, ZBTB48, SMAD3, FOXA1, TET2, SAP130, RELA, CREBBP, RAD21, SP140, PRDM9, MXD4, TAL1, MAX, XRCC5, NCOA3, SNAI2, LMO2, ESR1, OCA2, SETDB1, CTCF, AR, ZNF644, PTBP1, EGR1, FLI1, ZBTB26, NCOR1, NOTCH3, SCRT1, BRD4, E2F1, MAZ, HCFC1R1, SMC3, STAG1, TFAP2C
- Target gene symbol (double-evidenced CRMs): CYYR1
- Function elements
- Human SNPs: .
- Number of somatic mutations (coding): 0
- Number of somatic mutations (non-coding): 7
- Related genes and loops