Deatailed information for gene ENSG00000157542
Check detailed explainations here
- Basic information
- CohesinDB ID: CDBG00010107
- Gene Symbol: KCNJ6
- Ensembl ID: ENSG00000157542
-
Gene locus: chr21:37623558-38121345
Strand: -
- Gene type: protein_coding
- Double-evidenced cohesin related CRMs
- Whether cohesin-related CRMs (double-evidenced): True
- All evidenced type: Interaction
- Regulatory cohesin (double-evidenced):
chr21-36575350-36575709,
chr21-36576412-36577230,
chr21-36583668-36584068,
chr21-36584895-36585487,
chr21-36585745-36586353,
chr21-36587320-36592079,
chr21-36592299-36593515,
chr21-36594289-36594685,
chr21-36597896-36598145,
chr21-36938461-36938855,
chr21-36939198-36940146,
chr21-36974936-36975856,
chr21-36976322-36979183,
chr21-36980355-36981128,
chr21-36982411-36982979,
chr21-36983475-36983812,
chr21-36985242-36985787,
chr21-36986346-36986700,
chr21-36987033-36987211,
chr21-36987845-36988197,
chr21-36988629-36988824,
chr21-36989082-36991140,
chr21-36992148-36992448,
chr21-36992692-36993739,
chr21-36994195-36995191,
chr21-36996016-36996897,
chr21-36997444-36998032,
chr21-36999928-37001231,
chr21-37119296-37120160,
chr21-37150896-37151160,
chr21-37152332-37152680,
chr21-37152964-37155737,
chr21-37159050-37159484,
chr21-37161265-37161843,
chr21-37164415-37164605,
chr21-37166246-37167761,
chr21-37169450-37169719,
chr21-37175142-37175597,
chr21-37176615-37177604,
chr21-37181038-37181527,
chr21-37184532-37185430,
chr21-37189251-37189761,
chr21-37191662-37192249,
chr21-37193059-37193458,
chr21-37194982-37195379,
chr21-37195645-37195983,
chr21-37196307-37196642,
chr21-37197105-37197434,
chr21-37197847-37198109,
chr21-37198943-37199970,
chr21-37200435-37201600,
chr21-37202328-37202527,
chr21-37206852-37210359,
chr21-37210849-37210969,
chr21-37215161-37218095,
chr21-37220054-37222105,
chr21-37223873-37226814,
chr21-37227026-37228299,
chr21-37230559-37233254,
chr21-37233610-37234227,
chr21-37234937-37235500,
chr21-37237790-37238115,
chr21-37238740-37239885,
chr21-37240742-37241813,
chr21-37243152-37244419,
chr21-37244628-37245530,
chr21-37248968-37249483,
chr21-37249994-37251771,
chr21-37254108-37254748,
chr21-37256946-37259141,
chr21-37259350-37259929,
chr21-37263577-37265365,
chr21-37265595-37269410,
chr21-37270551-37271438,
chr21-37271793-37272440,
chr21-37272945-37273597,
chr21-37274026-37274267,
chr21-37274761-37275372,
chr21-37351226-37351559,
chr21-37352423-37352964,
chr21-37356357-37357538,
chr21-37357896-37359418,
chr21-37361494-37361790,
chr21-37362970-37363891,
chr21-37364688-37373796,
chr21-37374041-37376667,
chr21-37449911-37451094,
chr21-37451394-37453133,
chr21-37454218-37455770,
chr21-37456526-37456855,
chr21-37457092-37457603,
chr21-37458110-37460942,
chr21-37461967-37464126,
chr21-37465468-37465835,
chr21-37467127-37467422,
chr21-37468225-37468457,
chr21-37468762-37469282,
chr21-37469570-37470153,
chr21-37472439-37473360,
chr21-37474926-37475311,
chr21-37478789-37479291,
chr21-37479637-37479955,
chr21-37483561-37484153,
chr21-37485153-37485383,
chr21-37485921-37486191,
chr21-37489319-37490070,
chr21-37494670-37495794,
chr21-37496386-37498023,
chr21-37498550-37499117,
chr21-37501211-37501445,
chr21-37501854-37502204,
chr21-37503990-37504425,
chr21-37506066-37506334,
chr21-37507572-37508625,
chr21-37509446-37510263,
chr21-37510674-37510924,
chr21-37513898-37514561,
chr21-37517169-37518922,
chr21-37519283-37520043,
chr21-37520697-37520927,
chr21-37521747-37523668,
chr21-37527115-37527716,
chr21-37528156-37530049,
chr21-37530593-37532671,
chr21-37532943-37533875,
chr21-37534435-37535148,
chr21-37535724-37536412,
chr21-37536842-37537164,
chr21-37537415-37537884,
chr21-37538100-37538700,
chr21-37545632-37548152,
chr21-37548403-37549384,
chr21-37549977-37550331,
chr21-37550790-37553366,
chr21-37554097-37555011,
chr21-37555275-37556440,
chr21-37557099-37558213,
chr21-37558729-37559099,
chr21-37560348-37560783,
chr21-37562174-37566445,
chr21-37566898-37567476,
chr21-37567984-37568218,
chr21-37568432-37568753,
chr21-37573339-37573876,
chr21-37574240-37576121,
chr21-37619546-37620117,
chr21-37620432-37620693,
chr21-37622591-37624114,
chr21-37625250-37626011,
chr21-37626527-37627532,
chr21-37631492-37632217,
chr21-37634872-37635580,
chr21-37636032-37637375,
chr21-37639797-37640540,
chr21-37641601-37643989,
chr21-37644571-37645342,
chr21-37646382-37647083,
chr21-37647564-37648424,
chr21-37649610-37650298,
chr21-37654485-37655372,
chr21-37655751-37657541,
chr21-37658435-37660876,
chr21-37661563-37661865,
chr21-37664785-37665141,
chr21-37665901-37666635,
chr21-37667425-37669249,
chr21-37670538-37671794,
chr21-37673084-37677389,
chr21-37682721-37683272,
chr21-37683477-37684894,
chr21-37686462-37687749,
chr21-37690924-37691730,
chr21-37693407-37693614,
chr21-37696949-37697211,
chr21-37698134-37702382,
chr21-37703638-37705198,
chr21-37709173-37709675,
chr21-37710382-37713905,
chr21-37714213-37715154,
chr21-37717255-37717999,
chr21-37718834-37719293,
chr21-37720614-37721055,
chr21-37729837-37730152,
chr21-37730892-37731148,
chr21-37735375-37735832,
chr21-37742634-37743029,
chr21-37746968-37747115,
chr21-37749181-37749550,
chr21-37752967-37753612,
chr21-37755671-37757115,
chr21-37757343-37761477,
chr21-37761722-37763591,
chr21-37765099-37765707,
chr21-37767377-37769076,
chr21-37770044-37770264,
chr21-37771853-37772380,
chr21-37780918-37781922,
chr21-37782952-37783373,
chr21-37784201-37785372,
chr21-37786733-37788258,
chr21-37788623-37788904,
chr21-37793624-37793929,
chr21-37796782-37797141,
chr21-37801202-37801706,
chr21-37803574-37804429,
chr21-37807801-37808056,
chr21-37811683-37812097,
chr21-37815691-37816880,
chr21-37817250-37818781,
chr21-37821953-37822520,
chr21-37823026-37823235,
chr21-37827940-37830200,
chr21-37831560-37831793,
chr21-37832438-37833469,
chr21-37841983-37843096,
chr21-37845260-37846600,
chr21-37847705-37848194,
chr21-37848590-37851352,
chr21-37851997-37852496,
chr21-37854587-37856602,
chr21-37858133-37858424,
chr21-37862475-37863023,
chr21-37863574-37864405,
chr21-37865357-37865570,
chr21-37865868-37866779,
chr21-37868675-37872241,
chr21-37873511-37874441,
chr21-37874747-37875524,
chr21-37876665-37877767,
chr21-37878690-37879785,
chr21-37885450-37885617,
chr21-37886199-37886444,
chr21-37886698-37887156,
chr21-37887853-37888127,
chr21-37888751-37889074,
chr21-37892710-37893217,
chr21-37894398-37894666,
chr21-37896452-37897729,
chr21-37904870-37905118,
chr21-37909356-37909603,
chr21-37909892-37910463,
chr21-37913354-37918438,
chr21-37920197-37920610,
chr21-37920872-37921888,
chr21-37930941-37931013,
chr21-37939152-37939573,
chr21-37943352-37943708,
chr21-37944394-37945141,
chr21-37947164-37947554,
chr21-37949071-37949548,
chr21-37952299-37952784,
chr21-37959299-37959595,
chr21-37964191-37964487,
chr21-37965086-37965832,
chr21-37966348-37966529,
chr21-37968391-37968650,
chr21-37970143-37970299,
chr21-37972100-37972622,
chr21-37973965-37974473,
chr21-37976243-37976523,
chr21-37981356-37981676,
chr21-37983513-37984821,
chr21-37986630-37987505,
chr21-38004160-38004508,
chr21-38011633-38012071,
chr21-38014870-38015356,
chr21-38017604-38017892,
chr21-38020809-38021064,
chr21-38025645-38026023,
chr21-38027786-38028401,
chr21-38030671-38031016,
chr21-38036056-38036295,
chr21-38037187-38038083,
chr21-38038950-38040282,
chr21-38042171-38042741,
chr21-38052709-38053305,
chr21-38059512-38059763,
chr21-38075842-38076104,
chr21-38077039-38077371,
chr21-38077679-38077885,
chr21-38078126-38079068,
chr21-38080896-38081400,
chr21-38083087-38083355,
chr21-38089024-38089496,
chr21-38091949-38092674,
chr21-38095290-38095530,
chr21-38112450-38113274,
chr21-38113486-38113867,
chr21-38114618-38115226,
chr21-38116003-38116155,
chr21-38119092-38120170,
chr21-38120402-38123879,
chr21-38124153-38130792,
chr21-38135930-38141562,
chr21-38147929-38148377,
chr21-38151064-38151512,
chr21-38155827-38157030,
chr21-38157453-38161826,
chr21-38165622-38167121,
chr21-38167829-38173299,
chr21-38173632-38174464,
chr21-38216497-38222875,
chr21-38249205-38250252,
chr21-38250993-38251661,
chr21-38252145-38252348,
chr21-38253333-38253633,
chr21-38255085-38256173,
chr21-38256759-38258229,
chr21-38258446-38259956,
chr21-38260291-38265425,
chr21-38265648-38270119,
chr21-38270636-38271112,
chr21-38271912-38272896,
chr21-38273791-38279650,
chr21-38280103-38280841,
chr21-38281812-38282342,
chr21-38282614-38284469,
chr21-38284801-38299034,
chr21-38299358-38300863,
chr21-38301072-38308873,
chr21-38309457-38313340,
chr21-38314147-38315196,
chr21-38318023-38329470,
chr21-38330143-38331639,
chr21-38333133-38335676,
chr21-38340163-38340503,
chr21-38341496-38342080,
chr21-38342637-38344955,
chr21-38348297-38360784,
chr21-38362993-38363357,
chr21-38365365-38365661,
chr21-38375250-38375602,
chr21-38376290-38378168,
chr21-38379785-38381250,
chr21-38383484-38384452,
chr21-38384798-38385015,
chr21-38387044-38387525,
chr21-38388662-38389604,
chr21-38390009-38390598,
chr21-38394330-38394741,
chr21-38524820-38525118,
chr21-38525327-38525704,
chr21-38528423-38528734,
chr21-38531264-38531985,
chr21-38544663-38545173,
chr21-38548479-38549133,
chr21-38576611-38576930,
chr21-38577420-38578130,
chr21-38579596-38580252,
chr21-38581777-38582078,
chr21-38587293-38587727,
chr21-38591359-38594057,
chr21-38596343-38596638,
chr21-38597537-38597765,
chr21-38599047-38599490,
chr21-38655893-38656196,
chr21-38659292-38662622,
chr21-38664405-38665212,
chr21-38666630-38671138,
chr21-38675277-38675639,
chr21-38677433-38677813,
chr21-38678221-38680810,
chr21-38683388-38683795,
chr21-38692357-38692840,
chr21-38693068-38693253,
chr21-38696633-38696955,
chr21-38698999-38699651,
chr21-38700535-38701065,
chr21-38701561-38701796,
chr21-38702989-38703239,
chr21-38703807-38703915,
chr21-38707733-38707894,
chr21-38709620-38709912,
chr21-38710302-38714342,
chr21-38714859-38715706,
chr21-38717916-38718385,
chr21-38719363-38719850,
chr21-38722023-38723084,
chr21-38724534-38724638,
chr21-38772940-38775249,
chr21-38775576-38776072,
chr21-38780320-38781238,
chr21-38782672-38782927,
chr21-38784001-38785207,
chr21-38785970-38786654,
chr21-38786892-38788876,
chr21-38789235-38790110,
chr21-38793941-38799351,
chr21-38800466-38816528,
chr21-38816889-38818881,
chr21-38819201-38823342,
chr21-38823665-38827360,
chr21-39120833-39129703,
chr21-39132355-39132622,
chr21-39133040-39133962,
chr21-39134166-39141978,
chr21-39151590-39151880,
chr21-39153009-39153827,
chr21-39156042-39156407,
chr21-39156653-39158153,
chr21-39158424-39158895,
chr21-39159537-39161498,
chr21-39171426-39171861,
chr21-39172222-39172621,
chr21-39173429-39176751,
chr21-39178845-39179222,
chr21-39180628-39180930,
chr21-39181962-39185522,
chr21-39189884-39190456,
-
Co-expression with cohesin genes Rho = 0.0698
FDR = 0.0000
(Note: Cohesin does not need to 'co-express' with its regulated genes because expression of cohesin genes in conserved. The co-expression only provides addtional information)
- Tissue specificity
-
Gene expression across tissues (TPM):
-
Tissue specificity of gene (Gini-coefficient): 0.845
0:Conserved; 1:Tissue-specific For all genes: quantile-25%: 0.26, quantile-50%: 0.36 'quantile-75%': 0.60
-
Cell Specificity of regulatory cohesin (1:Tissue-specific; 0:Conserved): 0.886
0:Conserved; 1:Tissue-specific. For all cohesin sites: quantile-25%: 0.82, quantile-50%: 0.86 'quantile-75%': 0.90
- Cohesin-loop evidence
- Whether has cohesin-loop: True
-
Involved cell types for loop evidence: H9-endodermal,IMR-90,MCF-10A,TAMR-MCF7,MB157,DU145,Keratinocytes192627,GM12892,K1,hTERT-HME1,H1-Mesenchymal,H1-Mesendoderm,Olfactory,Hepatocyte-H9,GM19239,HEK293T,MCF-7,GM12891,SARS-Cov2-olfactory,GM12878,MSiPS,K-562,A-549,CyT49-pancreatic,HFFc6,PAEC,HeLa-S3,LNCaP,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,Primed-hESC,NCI-H1437,iPSC,REC-1,ARPE-19,HCT-116,OCI-AML-3,Hep-G2,HT-1197,Kelly,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,U-937,BMEC,HUES64,SU-DHL-4,CyT49-hESC,HUVEC,HL-60,NPC-H9,CyT49-endoderm,RT-112,Skin-Fibroblast,KBM-7,Jurkat,CC-2551,CyT49-Gut,HAP1,HFF-hTERT,MCF7-FASR
- Related loop:
chr21:33825000-33850000~~chr21:38075000-38100000,
chr21:34350000-34375000~~chr21:37600000-37625000,
chr21:36575000-36600000~~chr21:37650000-37675000,
chr21:36938657-36940545~~chr21:37641615-37643952,
chr21:36975000-37000000~~chr21:37625000-37650000,
chr21:36975000-37000000~~chr21:37650000-37675000,
chr21:36975000-37000000~~chr21:37850000-37875000,
chr21:36975000-37000000~~chr21:37900000-37925000,
chr21:36975000-37000000~~chr21:38125000-38150000,
chr21:36989176-36991225~~chr21:37915637-37917611,
chr21:37118796-37120506~~chr21:37641349-37644042,
chr21:37150000-37175000~~chr21:37625000-37650000,
chr21:37150000-37175000~~chr21:37650000-37675000,
chr21:37150000-37175000~~chr21:37900000-37925000,
chr21:37165903-37167741~~chr21:37711396-37713035,
chr21:37165919-37167804~~chr21:37641816-37643880,
chr21:37165919-37167819~~chr21:37641580-37643713,
chr21:37165941-37167805~~chr21:37641570-37643772,
chr21:37165963-37167815~~chr21:37641599-37643616,
chr21:37166002-37167735~~chr21:37641416-37644157,
chr21:37175000-37200000~~chr21:37625000-37650000,
chr21:37200000-37225000~~chr21:37625000-37650000,
chr21:37200000-37225000~~chr21:37650000-37675000,
chr21:37219743-37222181~~chr21:37641599-37643616,
chr21:37219804-37222187~~chr21:37641615-37643952,
chr21:37219959-37222123~~chr21:37641546-37643999,
chr21:37219960-37222181~~chr21:37641580-37643713,
chr21:37225000-37250000~~chr21:37600000-37625000,
chr21:37225000-37250000~~chr21:37625000-37650000,
chr21:37225000-37250000~~chr21:37650000-37675000,
chr21:37225000-37250000~~chr21:37900000-37925000,
chr21:37250000-37275000~~chr21:37625000-37650000,
chr21:37250000-37275000~~chr21:37650000-37675000,
chr21:37250000-37275000~~chr21:37850000-37875000,
chr21:37266529-37268622~~chr21:38120549-38122138,
chr21:37350000-37375000~~chr21:37625000-37650000,
chr21:37350000-37375000~~chr21:37650000-37675000,
chr21:37350000-37375000~~chr21:37900000-37925000,
chr21:37450000-37475000~~chr21:37625000-37650000,
chr21:37450000-37475000~~chr21:37650000-37675000,
chr21:37461731-37464184~~chr21:37641416-37644157,
chr21:37475000-37500000~~chr21:37625000-37650000,
chr21:37500000-37525000~~chr21:37625000-37650000,
chr21:37525000-37550000~~chr21:37625000-37650000,
chr21:37525000-37550000~~chr21:38075000-38100000,
chr21:37550000-37575000~~chr21:37650000-37675000,
chr21:37562596-37565431~~chr21:37641584-37643972,
chr21:37562693-37565509~~chr21:37657926-37660241,
chr21:37650000-37675000~~chr21:37800000-37825000,
chr21:37650000-37675000~~chr21:38350000-38375000,
chr21:37674122-37676950~~chr21:38355308-38357138,
chr21:37674157-37676230~~chr21:38125761-38128067,
chr21:37674157-37676230~~chr21:38355287-38357113,
chr21:37674162-37676306~~chr21:38125779-38127911,
chr21:37674191-37676998~~chr21:38125778-38127949,
chr21:37674265-37676273~~chr21:38355322-38357346,
chr21:37674271-37677011~~chr21:37915315-37917747,
chr21:37674274-37676281~~chr21:38125767-38127866,
chr21:37674294-37676153~~chr21:38351811-38353488,
chr21:37674313-37676283~~chr21:38351825-38353553,
chr21:37674327-37676274~~chr21:38125740-38127873,
chr21:37674344-37676262~~chr21:38125763-38127934,
chr21:37674344-37676262~~chr21:38355110-38357173,
chr21:37674476-37676308~~chr21:38125790-38127976,
chr21:37674496-37676216~~chr21:38355303-38357092,
chr21:37674691-37676025~~chr21:38352107-38353483,
chr21:37674725-37676093~~chr21:38355460-38356861,
chr21:37674744-37676208~~chr21:37915891-37917039,
chr21:37675000-37700000~~chr21:38325000-38350000,
chr21:37675000-37700000~~chr21:38350000-38375000,
chr21:37675000-37700000~~chr21:39125000-39150000,
chr21:37675000-37700000~~chr21:39150000-39175000,
chr21:37699607-37702263~~chr21:37914870-37917976,
chr21:37699607-37702263~~chr21:38125790-38127981,
chr21:37699607-37702263~~chr21:38158064-38160479,
chr21:37699607-37702263~~chr21:38355308-38357138,
chr21:37699652-37702225~~chr21:38351825-38353553,
chr21:37699652-37702225~~chr21:38355277-38357273,
chr21:37699679-37701740~~chr21:38355149-38357340,
chr21:37699731-37701840~~chr21:38125767-38127866,
chr21:37699733-37701770~~chr21:38125761-38128067,
chr21:37699733-37701770~~chr21:38355287-38357113,
chr21:37699764-37701688~~chr21:37915637-37917611,
chr21:37699764-37701688~~chr21:38125740-38127873,
chr21:37699764-37701688~~chr21:38351572-38353692,
chr21:37699764-37701688~~chr21:38355442-38357264,
chr21:37699767-37701789~~chr21:38125763-38127934,
chr21:37699767-37701789~~chr21:38351823-38353474,
chr21:37699767-37701789~~chr21:38355110-38357173,
chr21:37699768-37702167~~chr21:38351780-38353719,
chr21:37699774-37701724~~chr21:38355449-38357172,
chr21:37699776-37701715~~chr21:38351536-38353710,
chr21:37699776-37701715~~chr21:38355168-38357210,
chr21:37699782-37701775~~chr21:38125778-38127949,
chr21:37699782-37701784~~chr21:38355275-38357287,
chr21:37699790-37701835~~chr21:38169663-38172851,
chr21:37699790-37701835~~chr21:38351755-38353771,
chr21:37699790-37701835~~chr21:38355274-38357174,
chr21:37699792-37701710~~chr21:38351797-38353501,
chr21:37699792-37701710~~chr21:38355282-38357170,
chr21:37699800-37701800~~chr21:38125754-38127987,
chr21:37699800-37701800~~chr21:38169503-38172844,
chr21:37699813-37701825~~chr21:38125771-38127931,
chr21:37699825-37701662~~chr21:38355294-38357093,
chr21:37699827-37701713~~chr21:38355322-38357346,
chr21:37699831-37701768~~chr21:38125934-38127923,
chr21:37699831-37701768~~chr21:38355325-38357124,
chr21:37699842-37701862~~chr21:38125749-38127915,
chr21:37699849-37701736~~chr21:38125958-38127687,
chr21:37699862-37702222~~chr21:37915255-37918377,
chr21:37699862-37702222~~chr21:38125791-38127926,
chr21:37699862-37702222~~chr21:38355436-38357215,
chr21:37699932-37701752~~chr21:38126125-38127630,
chr21:37699965-37701774~~chr21:38355272-38357307,
chr21:37699988-37701699~~chr21:38126068-38127606,
chr21:37699994-37701579~~chr21:38126227-38127525,
chr21:37700000-37725000~~chr21:37825000-37850000,
chr21:37700000-37725000~~chr21:37875000-37900000,
chr21:37700000-37725000~~chr21:37900000-37925000,
chr21:37700000-37725000~~chr21:37925000-37950000,
chr21:37700000-37725000~~chr21:37950000-37975000,
chr21:37700000-37725000~~chr21:38050000-38075000,
chr21:37700000-37725000~~chr21:38100000-38125000,
chr21:37700000-37725000~~chr21:38125000-38150000,
chr21:37700000-37725000~~chr21:38150000-38175000,
chr21:37700000-37725000~~chr21:38325000-38350000,
chr21:37700000-37725000~~chr21:38350000-38375000,
chr21:37700000-37725000~~chr21:39125000-39150000,
chr21:37700000-37725000~~chr21:39150000-39175000,
chr21:37700002-37701549~~chr21:38355168-38357094,
chr21:37700007-37701742~~chr21:38126169-38127633,
chr21:37700028-37701831~~chr21:38125971-38127690,
chr21:37700051-37701798~~chr21:38351792-38353520,
chr21:37700051-37701798~~chr21:38355384-38357279,
chr21:37700066-37701913~~chr21:38126191-38127689,
chr21:37700073-37701763~~chr21:38126208-38127589,
chr21:37700099-37701668~~chr21:38126009-38127720,
chr21:37700112-37701685~~chr21:38125778-38127688,
chr21:37700112-37701685~~chr21:38351781-38353572,
chr21:37700162-37701530~~chr21:38126218-38127536,
chr21:37710058-37714050~~chr21:37769665-37771313,
chr21:37710058-37714050~~chr21:37915593-37917649,
chr21:37710058-37714050~~chr21:37917683-37919463,
chr21:37710058-37714050~~chr21:38139516-38141430,
chr21:37710487-37712977~~chr21:37915309-37917693,
chr21:37710487-37712977~~chr21:38125804-38127970,
chr21:37710487-37712977~~chr21:38355104-38357300,
chr21:37710499-37712987~~chr21:38125763-38127934,
chr21:37710638-37713716~~chr21:37914870-37917976,
chr21:37710638-37713716~~chr21:38125790-38127981,
chr21:37710736-37713758~~chr21:37914851-37917797,
chr21:37710736-37713758~~chr21:38125761-38128067,
chr21:37710736-37713758~~chr21:38169391-38172834,
chr21:37710736-37713758~~chr21:38355287-38357113,
chr21:37711372-37713046~~chr21:37915606-37917528,
chr21:37711372-37713046~~chr21:38125725-38127860,
chr21:37711375-37712997~~chr21:38217749-38220501,
chr21:37711375-37712997~~chr21:38355275-38357287,
chr21:37711392-37713025~~chr21:38125767-38127866,
chr21:37711392-37713166~~chr21:37915411-37917551,
chr21:37711392-37713166~~chr21:38125754-38127987,
chr21:37711394-37712982~~chr21:37915529-37918394,
chr21:37711394-37712982~~chr21:38125749-38127915,
chr21:37711394-37712982~~chr21:38351543-38353716,
chr21:37711394-37712982~~chr21:38355432-38357106,
chr21:37711395-37713012~~chr21:37914884-37917576,
chr21:37711395-37713012~~chr21:38125801-38127928,
chr21:37711395-37713012~~chr21:38355322-38357346,
chr21:37711396-37712996~~chr21:38125971-38127690,
chr21:37711396-37712996~~chr21:38355129-38357200,
chr21:37711396-37713035~~chr21:37915225-37917656,
chr21:37711397-37713457~~chr21:37915637-37917611,
chr21:37711397-37713457~~chr21:38125740-38127873,
chr21:37711397-37713457~~chr21:38355442-38357264,
chr21:37711406-37712950~~chr21:38125771-38127931,
chr21:37711406-37712996~~chr21:38351825-38353553,
chr21:37711406-37712996~~chr21:38355277-38357273,
chr21:37711408-37712950~~chr21:38125778-38127949,
chr21:37711418-37712993~~chr21:37915255-37918377,
chr21:37711418-37712993~~chr21:38125791-38127926,
chr21:37711434-37712961~~chr21:38126151-38127594,
chr21:37711434-37712993~~chr21:38125779-38127911,
chr21:37711438-37713000~~chr21:38125779-38127948,
chr21:37711438-37713000~~chr21:38351755-38353771,
chr21:37711438-37713000~~chr21:38355274-38357174,
chr21:37711441-37713006~~chr21:38125941-38127948,
chr21:37711441-37713006~~chr21:38355373-38357156,
chr21:37711442-37712977~~chr21:38126150-38127604,
chr21:37711445-37712965~~chr21:37915589-37917624,
chr21:37711445-37712965~~chr21:38125778-38127688,
chr21:37711446-37713025~~chr21:38125798-38127942,
chr21:37711455-37712980~~chr21:38125790-38127976,
chr21:37711455-37712980~~chr21:38351797-38353501,
chr21:37711455-37712980~~chr21:38355282-38357170,
chr21:37711458-37712951~~chr21:38355303-38357092,
chr21:37711462-37712982~~chr21:37915731-37917102,
chr21:37711462-37712982~~chr21:38126125-38127630,
chr21:37711462-37712982~~chr21:38355333-38356894,
chr21:37711467-37712985~~chr21:38125934-38127923,
chr21:37711467-37712985~~chr21:38355325-38357124,
chr21:37711477-37713059~~chr21:38351760-38353699,
chr21:37711511-37712978~~chr21:38351792-38353520,
chr21:37711568-37712969~~chr21:37915343-37917688,
chr21:37711568-37712969~~chr21:38355272-38357307,
chr21:37711574-37712971~~chr21:38126041-38127628,
chr21:37711651-37712969~~chr21:38126216-38127622,
chr21:37711651-37712969~~chr21:38355362-38356894,
chr21:37711676-37712970~~chr21:38355460-38356861,
chr21:37716838-37718336~~chr21:37915589-37917624,
chr21:37717141-37718351~~chr21:38125790-38127976,
chr21:37717141-37718351~~chr21:38351797-38353501,
chr21:37725000-37750000~~chr21:37875000-37900000,
chr21:37725000-37750000~~chr21:37900000-37925000,
chr21:37725000-37750000~~chr21:37950000-37975000,
chr21:37725000-37750000~~chr21:38050000-38075000,
chr21:37725000-37750000~~chr21:38075000-38100000,
chr21:37725000-37750000~~chr21:38125000-38150000,
chr21:37725000-37750000~~chr21:38300000-38325000,
chr21:37725000-37750000~~chr21:38325000-38350000,
chr21:37725000-37750000~~chr21:38350000-38375000,
chr21:37725000-37750000~~chr21:38375000-38400000,
chr21:37725000-37750000~~chr21:38700000-38725000,
chr21:37750000-37775000~~chr21:37875000-37900000,
chr21:37750000-37775000~~chr21:37900000-37925000,
chr21:37750000-37775000~~chr21:38025000-38050000,
chr21:37750000-37775000~~chr21:38100000-38125000,
chr21:37750000-37775000~~chr21:38125000-38150000,
chr21:37750000-37775000~~chr21:38150000-38175000,
chr21:37750000-37775000~~chr21:38350000-38375000,
chr21:37757478-37760684~~chr21:37872980-37874819,
chr21:37757478-37760684~~chr21:37914851-37917797,
chr21:37757478-37760684~~chr21:38125761-38128067,
chr21:37757478-37760684~~chr21:38355287-38357113,
chr21:37758041-37760564~~chr21:37914870-37917976,
chr21:37758041-37760564~~chr21:38125790-38127981,
chr21:37758041-37760564~~chr21:38351388-38354007,
chr21:37758054-37760218~~chr21:38125818-38127945,
chr21:37758054-37760218~~chr21:38355149-38357340,
chr21:37758083-37760394~~chr21:38120483-38122671,
chr21:37758083-37760394~~chr21:38125791-38127988,
chr21:37758083-37760394~~chr21:38355275-38357287,
chr21:37758088-37760278~~chr21:37915411-37917551,
chr21:37758088-37760278~~chr21:38125754-38127987,
chr21:37758096-37760150~~chr21:38351797-38353501,
chr21:37758111-37760132~~chr21:37915589-37917624,
chr21:37758111-37760132~~chr21:38125778-38127688,
chr21:37758111-37760132~~chr21:38355258-38357082,
chr21:37758115-37760170~~chr21:38120552-38122290,
chr21:37758115-37760170~~chr21:38125779-38127948,
chr21:37758115-37760184~~chr21:37915273-37917670,
chr21:37758129-37760281~~chr21:37915255-37918377,
chr21:37758129-37760281~~chr21:38125791-38127926,
chr21:37758130-37760186~~chr21:37915343-37917688,
chr21:37758130-37760186~~chr21:38126066-38127958,
chr21:37758130-37760186~~chr21:38351811-38353488,
chr21:37758130-37760186~~chr21:38355272-38357307,
chr21:37758135-37760096~~chr21:37915636-37917622,
chr21:37758140-37760150~~chr21:37915315-37917747,
chr21:37758140-37760150~~chr21:38125798-38127942,
chr21:37758144-37760203~~chr21:37915295-37918332,
chr21:37758144-37760203~~chr21:38125941-38127948,
chr21:37758163-37760055~~chr21:38125763-38127934,
chr21:37758163-37760055~~chr21:38351823-38353474,
chr21:37758163-37760055~~chr21:38355110-38357173,
chr21:37758198-37760138~~chr21:37914884-37917576,
chr21:37758198-37760138~~chr21:38125801-38127928,
chr21:37758212-37760210~~chr21:37915283-37917809,
chr21:37758212-37760210~~chr21:38125779-38127911,
chr21:37758230-37760229~~chr21:37915529-37918394,
chr21:37758230-37760229~~chr21:38125749-38127915,
chr21:37758320-37760162~~chr21:37915283-37917707,
chr21:37758324-37760023~~chr21:37915309-37917693,
chr21:37758324-37760023~~chr21:38125804-38127970,
chr21:37758368-37760158~~chr21:37915292-37917676,
chr21:37758368-37760158~~chr21:38125770-38127709,
chr21:37758370-37760095~~chr21:38125971-38127690,
chr21:37758391-37760172~~chr21:38126009-38127637,
chr21:37758392-37760187~~chr21:38355277-38357273,
chr21:37758409-37759787~~chr21:37915637-37917611,
chr21:37758410-37759974~~chr21:38125958-38127687,
chr21:37758410-37760220~~chr21:38355384-38357279,
chr21:37758419-37759941~~chr21:38125927-38127658,
chr21:37758428-37759911~~chr21:38125778-38127949,
chr21:37758446-37759976~~chr21:38125725-38127860,
chr21:37758468-37759930~~chr21:38126131-38127619,
chr21:37758479-37759910~~chr21:38126125-38127630,
chr21:37758504-37759946~~chr21:38355473-38356966,
chr21:37758513-37759885~~chr21:38126191-38127689,
chr21:37758520-37759866~~chr21:38126208-38127589,
chr21:37758520-37759927~~chr21:38352107-38353483,
chr21:37758533-37759896~~chr21:38169685-38171409,
chr21:37758563-37759871~~chr21:38126251-38127506,
chr21:37775000-37800000~~chr21:37875000-37900000,
chr21:37775000-37800000~~chr21:37900000-37925000,
chr21:37800000-37825000~~chr21:37900000-37925000,
chr21:37800000-37825000~~chr21:38125000-38150000,
chr21:37800000-37825000~~chr21:38650000-38675000,
chr21:37825000-37850000~~chr21:37950000-37975000,
chr21:37825000-37850000~~chr21:38050000-38075000,
chr21:37850000-37875000~~chr21:37950000-37975000,
chr21:37850000-37875000~~chr21:38325000-38350000,
chr21:37850000-37875000~~chr21:38775000-38800000,
chr21:37850000-37875000~~chr21:38800000-38825000,
chr21:37850000-37875000~~chr21:39175000-39200000,
chr21:37873271-37874436~~chr21:38355282-38357170,
chr21:37875000-37900000~~chr21:38350000-38375000,
chr21:37900000-37925000~~chr21:38125000-38150000,
chr21:37900000-37925000~~chr21:38150000-38175000,
chr21:37900000-37925000~~chr21:38325000-38350000,
chr21:37900000-37925000~~chr21:38350000-38375000,
chr21:37914870-37917976~~chr21:38355308-38357138,
chr21:37915283-37917809~~chr21:38125779-38127911,
chr21:37915315-37917747~~chr21:38125798-38127942,
chr21:37915343-37917688~~chr21:38126066-38127958,
chr21:37915529-37918394~~chr21:38125749-38127915,
chr21:37915529-37918394~~chr21:38355432-38357106,
chr21:37915593-37917649~~chr21:38125927-38127658,
chr21:37915609-37917622~~chr21:38125799-38127662,
chr21:37917683-37919463~~chr21:38139516-38141430,
chr21:37925000-37950000~~chr21:38025000-38050000,
chr21:37925000-37950000~~chr21:38350000-38375000,
chr21:37925000-37950000~~chr21:38525000-38550000,
chr21:37950000-37975000~~chr21:38050000-38075000,
chr21:37950000-37975000~~chr21:38075000-38100000,
chr21:37950000-37975000~~chr21:38125000-38150000,
chr21:38000000-38025000~~chr21:38100000-38125000,
chr21:38025000-38050000~~chr21:38150000-38175000,
chr21:38025000-38050000~~chr21:38325000-38350000,
chr21:38025000-38050000~~chr21:38350000-38375000,
chr21:38038817-38040294~~chr21:38125790-38127976,
chr21:38038824-38040349~~chr21:38125769-38128010,
chr21:38050000-38075000~~chr21:38150000-38175000,
chr21:38050000-38075000~~chr21:38325000-38350000,
chr21:38050000-38075000~~chr21:38350000-38375000,
chr21:38050000-38075000~~chr21:38375000-38400000,
chr21:38050000-38075000~~chr21:38575000-38600000,
chr21:38050000-38075000~~chr21:38650000-38675000,
chr21:38050000-38075000~~chr21:38675000-38700000,
chr21:38075000-38100000~~chr21:38525000-38550000,
chr21:38075000-38100000~~chr21:38700000-38725000,
chr21:38125000-38150000~~chr21:38250000-38275000,
chr21:38125000-38150000~~chr21:38275000-38300000,
- Cohesin-loop type: HiChIP,HiC,Direct,ChIAPET
- Cohesin-loop study:
4DNFIQYQWPF5, GSE95015, GSE43070, 4DNFIDJ2JZ7Q, 4DNFITUOMFUQ, ENCSR794RDS, 4DNFIBN9K4V9, ENCSR852KQC, ENCSR361AYD, 4DNFIDSWKFF5, GSE103148, 4DNFI7H4II2V, 4DNFIZ4F74QR, 4DNFIEYQ5ZIR, 4DNFIREVU1Z5, 4DNFIA6NSSBJ, ENCSR113OIR, 4DNFI9VXTBE2, 4DNFIKYXMF1E, ENCSR668RDP, 4DNFIL5K3MA1, GSE97394, 4DNFICEGAHRC, 4DNFIE8T8JZ8, 4DNFI1E6NJQJ, 4DNFI9YAVTI1, ENCSR658RQQ, ENCSR299VMZ, 4DNFI6XD6JAQ, 4DNFISPUVQHA, 4DNFI8Y9SRP2, GSE108869, GSE116872, 4DNFIAWVDQ8C, ENCSR305RTT, ENCSR000FDB, 4DNFI7XAZNNQ, ENCSR527RXH, GSE105028, ENCSR833CMG, 4DNFIBKZK63V, ENCSR033GUP, 4DNFIQWD8ZYD, 4DNFI3CFMRID, ENCSR662QKG, GSE94872, GSE118716, ENCSR499RVD, 4DNFIB7QTIMH, GSE126792, ENCSR146FPM, 4DNFIOX3BGNE, ENCSR478BMT, GSE69643, GSE155380, 4DNFIJWBWE41, 4DNFICSTCJQZ, ENCSR587DSF, ENCSR452NHL, 4DNFIIMZB6Y9, GSE80820, GSE52457, 4DNFIBT4EAKN, Direct, ENCSR314HAC, ENCSR479MTN, 4DNFIAS8LV1C, 4DNFIX7H3CE2, 4DNFIYIAUEPW, ENCSR244BBG, ENCSR991JXX, 4DNFI9815EEJ, ENCSR778FXH, 4DNFI9ZWZ5BS, 4DNFI2J1ODWB, 4DNFIVJ3IIQL, 4DNFIQ2687RT, 4DNFIFLJLIS5, 4DNFIDBIEXI7, 4DNFIDZT7PR8, 4DNFIZGCA8AH, 4DNFIH7TH4MF, 4DNFIT96Z365, 4DNFIWZEN3FF, ENCSR194SRI, 4DNFIR8OU6QJ, 4DNFI6CWNUFL, 4DNFI5CGQ46V, 4DNFIE8E4ANZ, GSE120294, 4DNFIPV5KFMK, ENCSR672RHL, 4DNFIW8TIFI5, ENCSR410MDC, 4DNFIMEG1QIC, 4DNFIXU2KPNQ, ENCSR732QOH, 4DNFIBM714BP, 4DNFIF2D3TL9, 4DNFIFHU75I5, 4DNFIYD8LO9Z, ENCSR123UVP, 4DNFIL9M97T2, 4DNFIJBJ6QVH, ENCSR550JLK, 4DNFI3A3VYWU, 4DNFIJ7OAIFQ, 4DNFIM2BMJ33, GSE165038, 4DNFIALNLR78, 4DNFIYDBBSE3, ENCSR386KHY, 4DNFIEJEFCAM, ENCSR393LOP, GSE44267, 4DNFIPAF4PYT, ENCSR404HWQ, 4DNFIE5TEYK7, 4DNFIJ8JKKWJ, 4DNFIFI6NIKJ, 4DNFIDKJFK2S, ENCSR933UZH, ENCSR094EIC, ENCSR507AHE, GSE116869, 4DNFI8649RQJ, 4DNFIRZA6EV6, GSE116875, 4DNFIMROE6N4, GSE108787, 4DNFI5SUHCGZ, ENCSR545YBD, 4DNFIILDWK8M, 4DNFIP25GZGA, ENCSR866FWQ, 4DNFII6AN691, GSE111537, GSE131580, ENCSR381DCY, ENCSR981FNA, 4DNFIV239W4L, 4DNFIOUSETUP, ENCSR752QCX, ENCSR128RPG, 4DNFI1UEG1HD, GSE101921, ENCSR228TUX, 4DNFI8JFOAJT, 4DNFIOCW5AEM, 4DNFIC3HAU11, 4DNFIQVMVRP6, ENCSR247RGI, ENCSR110JOO, ENCSR338WUS, 4DNFI5LCW273, 4DNFIP71EWXC, 4DNFINEQY95T, 4DNFIHN2QSMX, 4DNFII84FBKM, 4DNFIVSCH2CH
- Cohesin-loop subunit: SMC1,CTCF,Other,Rad21
- Cohesin-DEGs evidence
- Whether cohesin DEGs: False
-
Involved cell types for DEG evidence: Fibroblast,Cortical-non-neuronal
- Cohesin-DEGs, number of studies: 2
- Cohesin-DEGs, study: GSE150117,SRP050576
- Cohesin-DEGs, subunit: CdLS