Filtered: 34 genes regulated by 225 cohesin sites
TripleEvidence
AllEvidence
GeneType
| ID | EnsemblID | Symbol | Gene location | Strand | Genetype | Double evidenced | Double evidenced cohesin | Loop evidence | Loop celltype | Loop type | Loop study | Loop subunit | Cohesin DEGs | Number of studies | DEGs celltype | DEGs studies | DEGs subunit | Coexpression Rho | Coexpression FDR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CDBG00040259 | ENSG00000252273 | RNU6-426P | chr21:16035412-16035509 | - | snRNA | False | . | True | Direct | Direct | Other | False | 0 | . | . | 0.006425 | 0.419019 | ||
| CDBG00022969 | ENSG00000214976 | VDAC2P1 | chr21:16094414-16095372 | - | processed_pseudogene | False | . | True | IMR-90,MCF-10A,MB157,Keratinocytes192627,Olfactory,SARS-Cov2-olfactory,GM12878,A-549,HFFc6,HeLa-S3,H9-hESC,REC-1,Hep-G2,H1-hESC,HCC1599,Motor-Neuron,HUVEC,CyT49-endoderm,CC-2551,HFF-hTERT,HAP1 | HiChIP,HiC,Direct | 4DNFIQWD8ZYD,ENCSR662QKG,GSE95015,ENCSR194SRI,GSE116875,GSE94872,4DNFIMROE6N4,ENCSR499RVD,ENCSR794RDS,GSE116869,4DNFI5SUHCGZ,ENCSR852KQC,GSE120294,4DNFIZ4F74QR,4DNFIW8TIFI5,ENCSR410MDC,4DNFIMEG1QIC,4DNFIEYQ5ZIR,4DNFI6EIFUZI,4DNFIF2D3TL9,4DNFIA6NSSBJ,4DNFIREVU1Z5,4DNFII6AN691,4DNFIYD8LO9Z,4DNFIRKGMZRQ,4DNFIJWBWE41,4DNFICSTCJQZ,4DNFICEGAHRC,4DNFIIMZB6Y9,4DNFIL9M97T2,4DNFIE8T8JZ8,4DNFI1E6NJQJ,4DNFI9YAVTI1,4DNFIBT4EAKN,4DNFI3A3VYWU,Direct,4DNFISPUVQHA,4DNFIAS8LV1C,4DNFIX7H3CE2,4DNFI6JJQKFJ,4DNFI1UEG1HD,4DNFIYDBBSE3,GSE101921,4DNFIYIAUEPW,ENCSR244BBG,ENCSR228TUX,GSE116872,4DNFI8JFOAJT,ENCSR393LOP,4DNFIC3HAU11,ENCSR305RTT,4DNFI2J1ODWB,4DNFIFLJLIS5,GSE105028,4DNFIDZT7PR8,4DNFIS5F6EBL,4DNFIH7TH4MF,4DNFII84FBKM | SMC1,CTCF,Other,Rad21 | False | 0 | . | . | 0.112873 | 0.000000 | |
| CDBG00025438 | ENSG00000224602 | RPS26P5 | chr21:16121309-16121644 | - | processed_pseudogene | False | . | True | HFF-hTERT,HeLa-S3,H1-hESC | HiC,Direct,ChIAPET | 4DNFIQVMVRP6,Direct,ENCSR587DSF,4DNFIW8TIFI5,4DNFI7H4II2V | Other,Rad21 | False | 0 | . | . | 0.042011 | 0.000000 | |
| CDBG00018822 | ENSG00000201025 | SNORD74B | chr21:16284695-16284768 | - | snoRNA | False | . | True | MCF-7,HEK293T,Liver,RT-112,Psoas,MB157,Hippocampus,H1-hESC,Motor-Neuron,HFF-hTERT,HAP1,NaiveB,HeLa-S3,H1-Trophectoderm,H9-hESC,BMEC,Hepatocyte-H9,H1-Mesenchymal | HiChIP,HiC,Direct,ChIAPET | 4DNFI8649RQJ,GSE87112,GSE95015,4DNFIWZEN3FF,GSE43070,4DNFIE8E4ANZ,GSE108787,ENCSR794RDS,GSE116869,GSE84022,4DNFIW8TIFI5,4DNFIBM714BP,4DNFIYD8LO9Z,ENCSR381DCY,GSE155380,GSE52457,4DNFI3A3VYWU,Direct,GSE44267,4DNFIQVMVRP6,4DNFIFI6NIKJ,GSE105028,GSE58752,ENCSR507AHE | SMC1,Other,Rad21 | False | 0 | . | . | 0.009434 | 0.230685 | |
| CDBG00050322 | ENSG00000270071 | AP001172.1 | chr21:16291078-16310382 | - | lncRNA | False | . | True | MCF-10A,Psoas,MB157,Keratinocytes192627,H1-Mesenchymal,MCF-7,HEK293T,HeLa-S3,H1-Trophectoderm,H9-hESC,Hippocampus,Liver,H1-hESC,Motor-Neuron,NaiveB,BMEC,HUVEC,RT-112,HFF-hTERT,HAP1 | HiChIP,HiC,Direct | 4DNFI8649RQJ,GSE87112,GSE95015,4DNFIWZEN3FF,GSE43070,GSE94872,4DNFIE8E4ANZ,GSE108787,ENCSR794RDS,GSE116869,GSE84022,4DNFIW8TIFI5,4DNFIBM714BP,4DNFIA6NSSBJ,4DNFIYD8LO9Z,GSE155380,4DNFIL9M97T2,GSE52457,4DNFI3A3VYWU,Direct,4DNFI6JJQKFJ,GSE101921,GSE44267,4DNFIQVMVRP6,4DNFIFI6NIKJ,ENCSR094EIC,GSE105028,GSE58752,ENCSR507AHE | Other,SMC1 | False | 0 | . | . | 0.175544 | 0.000000 | |
| CDBG00050363 | ENSG00000270139 | AP001172.2 | chr21:16417138-16419080 | - | lncRNA | False | . | True | MCF-7,Liver,H1-hESC,HFF-hTERT,PAEC,HeLa-S3,H9-hESC,H1-Mesenchymal,Hepatocyte-H9 | HiC,Direct,ChIAPET | 4DNFI8649RQJ,GSE52457,4DNFIQVMVRP6,4DNFIWZEN3FF,4DNFIM2BMJ33,4DNFIVJ3IIQL,Direct,4DNFIFI6NIKJ,ENCSR668RDP,4DNFIE8E4ANZ,ENCSR381DCY,4DNFICEGAHRC,GSE105028,GSE108787,GSE58752,4DNFIZF1KI43,4DNFI7H4II2V | Other,Rad21 | False | 0 | . | . | 0.047769 | 0.000000 | |
| CDBG00059404 | ENSG00000287066 | AP000962.3 | chr21:16505554-16507916 | - | lncRNA | False | . | True | HFF-hTERT | HiC,Direct | 4DNFISPUVQHA,4DNFI8649RQJ,Direct | Other | False | 0 | . | . | 0.000000 | 1.000000 | |
| CDBG00056227 | ENSG00000280432 | AP000962.2 | chr21:16525918-16527019 | + | TEC | False | . | True | HFF-hTERT,Liver,HeLa-S3 | HiC,Direct | 4DNFI8649RQJ,Direct,4DNFISPUVQHA,4DNFIAS8LV1C,GSE58752 | Other | False | 0 | . | . | 0.204325 | 0.000000 | |
| CDBG00021182 | ENSG00000207638 | MIR99A | chr21:16539088-16539169 | + | miRNA | False | . | True | Liver,HeLa-S3 | HiC,Direct | 4DNFIAS8LV1C,Direct,GSE58752 | Other | False | 0 | . | . | 0.016982 | 0.028620 | |
| CDBG00017974 | ENSG00000199030 | MIRLET7C | chr21:16539827-16539911 | + | miRNA | False | . | True | Liver,HeLa-S3 | HiC,Direct | 4DNFIAS8LV1C,Direct,GSE58752 | Other | False | 0 | . | . | 0.026053 | 0.000710 | |
| CDBG00050259 | ENSG00000269950 | AP000962.1 | chr21:16574717-16582637 | - | lncRNA | False | . | True | MCF-7,IMR-90,H1-hESC,A-549,HFF-hTERT,HFFc6,HeLa-S3,H9-hESC,H1-Mesenchymal,Olfactory | HiChIP,HiC,Direct,ChIAPET | 4DNFI8649RQJ,GSE52457,4DNFIQVMVRP6,ENCSR662QKG,4DNFIWZEN3FF,4DNFIVJ3IIQL,Direct,4DNFIMROE6N4,4DNFIRKGMZRQ,4DNFIE8E4ANZ,4DNFIFLJLIS5,4DNFICEGAHRC,GSE105028,4DNFI5SUHCGZ,ENCSR852KQC,ENCSR587DSF,GSE108787,4DNFII84FBKM,4DNFI7H4II2V | CTCF,Other,Rad21 | False | 0 | . | . | 0.248770 | 0.000000 | |
| CDBG00021298 | ENSG00000207863 | MIR125B2 | chr21:16590236-16590325 | + | miRNA | False | . | True | MCF-7,H1-hESC,A-549,HFF-hTERT,HFFc6,HeLa-S3,H9-hESC,H1-Mesenchymal,Olfactory | HiChIP,HiC,Direct,ChIAPET | 4DNFI8649RQJ,GSE52457,4DNFIQVMVRP6,ENCSR662QKG,4DNFIWZEN3FF,4DNFIVJ3IIQL,Direct,4DNFIRKGMZRQ,4DNFIE8E4ANZ,4DNFIFLJLIS5,GSE105028,GSE108787,4DNFI5SUHCGZ,ENCSR587DSF,4DNFII84FBKM,4DNFI7H4II2V | CTCF,Other,Rad21 | False | 0 | . | . | 0.010939 | 0.163063 | |
| CDBG00034949 | ENSG00000239023 | RNU1-98P | chr21:16718997-16719157 | + | snRNA | False | . | True | H9-hESC | HiChIP,Direct | GSE105028,Direct | Other,Rad21 | False | 0 | . | . | 0.012843 | 0.100061 | |
| CDBG00034366 | ENSG00000237735 | AF130359.1 | chr21:16754518-16815688 | - | lncRNA | False | . | True | RT-112,HFF-hTERT,HAP1,HFFc6,HeLa-S3,H9-hESC,H1-Mesenchymal | HiChIP,HiC,Direct | 4DNFI1E6NJQJ,4DNFI8649RQJ,GSE52457,Direct,4DNFIMROE6N4,4DNFIE8E4ANZ,GSE105028,GSE155380 | Other,Rad21 | False | 0 | . | . | 0.042265 | 0.000000 | |
| CDBG00031063 | ENSG00000232886 | AF212831.1 | chr21:16862874-16873691 | - | lncRNA | False | . | True | H9-hESC,Olfactory,HeLa-S3,Motor-Neuron | HiChIP,HiC,Direct | 4DNFIQVMVRP6,ENCSR866FWQ,Direct,4DNFIRKGMZRQ,GSE105028 | Other,Rad21 | False | 0 | . | . | 0.062205 | 0.000000 | |
| CDBG00026209 | ENSG00000225735 | NEK4P1 | chr21:17210468-17211347 | - | processed_pseudogene | False | . | True | H1-Mesenchymal | HiC | GSE52457 | Other | False | 0 | . | . | 0.081301 | 0.000000 | |
| CDBG00054631 | ENSG00000278181 | AP000457.1 | chr21:17296218-17296596 | + | processed_pseudogene | False | . | True | A-549 | HiC,Direct | ENCSR244BBG,ENCSR499RVD,Direct | Other | False | 0 | . | . | 0.022076 | 0.004229 | |
| CDBG00040386 | ENSG00000252462 | RNU6-113P | chr21:17431546-17431647 | + | snRNA | False | . | True | HFF-hTERT,HFFc6,H1-hESC | HiC,Direct | 4DNFI8649RQJ,4DNFIB7QTIMH,Direct,4DNFI5SUHCGZ | Other | False | 0 | . | . | -0.001676 | 0.840231 | |
| CDBG00030832 | ENSG00000232560 | LINC01549 | chr21:17438820-17450104 | + | lncRNA | False | . | True | IMR-90,H1-hESC,HFF-hTERT,HAP1,HFFc6 | HiC,Direct | 4DNFI8649RQJ,4DNFI3A3VYWU,Direct,4DNFIB7QTIMH,4DNFI5SUHCGZ,ENCSR852KQC,4DNFIH7TH4MF | Other | False | 0 | . | . | -0.096797 | 0.000000 | |
| CDBG00026802 | ENSG00000226580 | RPL39P40 | chr21:17500678-17500824 | - | processed_pseudogene | False | . | True | H9-hESC,HFFc6,A-549,HEK293T | HiChIP,HiC,Direct | GSE44267,ENCSR662QKG,Direct,GSE105028,4DNFI5SUHCGZ | Other,Rad21 | False | 0 | . | . | -0.120937 | 0.000000 | |
| CDBG00048545 | ENSG00000266195 | RN7SL163P | chr21:17506452-17506728 | + | misc_RNA | False | . | True | HEK293T,ARPE-19,GM12878,H1-hESC,A-549,HFFc6,H9-hESC | HiChIP,HiC,Direct,ChIAPET | GSE44267,ENCSR662QKG,ENCSR110JOO,Direct,GSE105028,4DNFI5SUHCGZ,ENCSR981FNA,ENCSR587DSF | Other,Rad21 | False | 0 | . | . | 0.022560 | 0.003452 | |
| CDBG00009781 | ENSG00000154639 | CXADR | chr21:17513129-17593579 | + | protein_coding | True | chr21-17526082-17526410,chr21-17421921-17422186,chr21-17538088-17538316,chr21-17584154-17587049,chr21-17552603-17553088,chr21-17427928-17429100,chr21-17553654-17556173,chr21-17536516-17536792,chr21-17440398-17441901,chr21-17549142-17551469,chr21-17548224-17548770,chr21-17442241-17442520,chr21-17538838-17539668,chr21-16933256-16933897,chr21-17390128-17390618,chr21-17447844-17448535,chr21-17423187-17423402,chr21-17673220-17674924,chr21-17522555-17523601,chr21-17376067-17376842,chr21-17662469-17662816,chr21-15891358-15891425,chr21-17804509-17804871,chr21-17801315-17801609,chr21-17808054-17808570,chr21-17114019-17114504,chr21-17581951-17582360,chr21-17515319-17515802,chr21-17610934-17613664,chr21-17444297-17444731,chr21-17568081-17568434,chr21-15893413-15897253,chr21-17119410-17120229,chr21-17661485-17661799,chr21-17579296-17579640,chr21-17534793-17535275,chr21-17537036-17537850,chr21-17574945-17575093,chr21-17385065-17389738,chr21-17802147-17803028,chr21-17560450-17560648,chr21-17660473-17661158,chr21-17541078-17541535,chr21-17508331-17509012,chr21-17542111-17543488,chr21-17824544-17824781,chr21-17404236-17404703,chr21-17575466-17576102,chr21-17418323-17418617,chr21-17817153-17820909,chr21-17528207-17529568,chr21-17120454-17120726,chr21-17391038-17391864,chr21-17418933-17419226,chr21-17573618-17573899,chr21-17527049-17527805,chr21-17393972-17394584,chr21-17383874-17384847,chr21-17592922-17593114,chr21-16941592-16944786,chr21-17436920-17439074,chr21-17051166-17051326,chr21-17429707-17430271,chr21-15876479-15876649,chr21-17650364-17650607,chr21-17443841-17444029,chr21-17510239-17514988,chr21-17402988-17403462,chr21-17105633-17106526,chr21-17433211-17433485,chr21-17564728-17565077,chr21-17392847-17393210,chr21-17434658-17435287,chr21-17668672-17669176,chr21-17523868-17524951,chr21-17377529-17377890,chr21-17100049-17100447 | True | IMR-90,MCF-10A,GM12892,K1,hTERT-HME1,H1-Mesenchymal,H1-Mesendoderm,Olfactory,Hepatocyte-H9,MCF-7,HEK293T,GM12891,SARS-Cov2-olfactory,GM12878,K-562,A-549,HFFc6,PAEC,HeLa-S3,LNCaP,H1-Trophectoderm,SU-DHL-2,H9-hESC,KU-19-19,Primed-hESC,NCI-H1437,Liver,ARPE-19,HCT-116,OCI-AML-3,Hep-G2,HT-1197,H1-hESC,HCC1599,GM19238,HT-1376,Motor-Neuron,MSLCL,GM19240,BMEC,SU-DHL-4,HUVEC,NPC-H9,CyT49-endoderm,RT-112,Skin-Fibroblast,Jurkat,HFF-hTERT,HAP1 | HiChIP,HiC,Direct,ChIAPET | GSE95015,GSE43070,4DNFIDJ2JZ7Q,ENCSR794RDS,4DNFIBN9K4V9,ENCSR361AYD,4DNFIZ4F74QR,4DNFI7H4II2V,4DNFIREVU1Z5,4DNFIA6NSSBJ,ENCSR113OIR,4DNFI9VXTBE2,4DNFIRKGMZRQ,ENCSR668RDP,4DNFICEGAHRC,4DNFIE8T8JZ8,4DNFI9YAVTI1,ENCSR658RQQ,ENCSR299VMZ,4DNFISPUVQHA,4DNFIK61ILGM,GSE108869,GSE116872,4DNFI7XAZNNQ,ENCSR527RXH,GSE105028,ENCSR833CMG,4DNFIBKZK63V,ENCSR033GUP,4DNFIQWD8ZYD,4DNFI3CFMRID,ENCSR662QKG,GSE94872,ENCSR499RVD,4DNFIB7QTIMH,ENCSR146FPM,GSE69643,GSE155380,4DNFIJWBWE41,ENCSR587DSF,ENCSR452NHL,GSE52457,4DNFIBT4EAKN,Direct,ENCSR314HAC,4DNFIXWCLD4M,4DNFIH9U4I7I,4DNFIAS8LV1C,4DNFIX7H3CE2,4DNFIYIAUEPW,ENCSR244BBG,ENCSR991JXX,4DNFIVJ3IIQL,4DNFIFLJLIS5,4DNFIDBIEXI7,4DNFIZGCA8AH,4DNFIWZEN3FF,ENCSR194SRI,4DNFIE8E4ANZ,GSE120294,4DNFIW8TIFI5,ENCSR732QOH,4DNFIBM714BP,4DNFIF2D3TL9,4DNFIYD8LO9Z,4DNFIM2BMJ33,4DNFIYDBBSE3,ENCSR386KHY,4DNFIEJEFCAM,ENCSR393LOP,GSE44267,4DNFIPAF4PYT,ENCSR404HWQ,4DNFIFI6NIKJ,ENCSR933UZH,ENCSR094EIC,GSE58752,ENCSR507AHE,4DNFI8649RQJ,4DNFIMROE6N4,GSE108787,4DNFI5SUHCGZ,ENCSR866FWQ,4DNFI6EIFUZI,GSE111537,ENCSR381DCY,ENCSR981FNA,4DNFIV239W4L,4DNFIOUSETUP,ENCSR752QCX,ENCSR128RPG,ENCSR312TUD,4DNFI6JJQKFJ,GSE101921,4DNFIOCW5AEM,4DNFIQVMVRP6,ENCSR247RGI,ENCSR110JOO,ENCSR338WUS,4DNFINEQY95T,4DNFIHN2QSMX,4DNFII84FBKM | SMC1,CTCF,Other,Rad21 | True | 16 | HPC,OCI-AML-3,SLK,MCF-10A,U2OS,HeLa-S3,Keratinocytes,NUGC-3 | GSE89799,GSE83870,GSE137253,GSE111537,GSE101921,GSE119828,GSE154086,GSE138937,GSE108869,GSE130558 | SMC3,NIPBL,SA2,WAPL,CTCF,SMC1,Rad21,CdLS | -0.058622 | 0.000000 |
| CDBG00030635 | ENSG00000232260 | BTF3L4P1 | chr21:17518525-17518993 | - | processed_pseudogene | False | . | True | HEK293T,ARPE-19,GM12878,H1-hESC,A-549,HFFc6,PAEC,H9-hESC | HiChIP,HiC,Direct,ChIAPET | GSE44267,ENCSR662QKG,ENCSR110JOO,Direct,ENCSR668RDP,GSE105028,4DNFI5SUHCGZ,ENCSR981FNA,ENCSR587DSF | Other,Rad21 | False | 0 | . | . | 0.021911 | 0.004528 | |
| CDBG00018706 | ENSG00000200754 | Y_RNA | chr21:17527139-17527247 | - | misc_RNA | False | . | True | HEK293T,H1-hESC,A-549,HFFc6,H9-hESC | HiChIP,HiC,Direct,ChIAPET | GSE44267,ENCSR662QKG,Direct,GSE105028,4DNFI5SUHCGZ,4DNFIJWBWE41,ENCSR587DSF | Other,Rad21 | False | 0 | . | . | -0.008711 | 0.269349 | |
| CDBG00018357 | ENSG00000199962 | Y_RNA | chr21:17576797-17576906 | + | misc_RNA | False | . | True | IMR-90,MCF-10A,H1-Mesenchymal,H1-Mesendoderm,Olfactory,MCF-7,SARS-Cov2-olfactory,GM12878,K-562,A-549,HFFc6,HeLa-S3,H1-Trophectoderm,H9-hESC,Liver,OCI-AML-3,HCT-116,Hep-G2,H1-hESC,HCC1599,Motor-Neuron,BMEC,HUVEC,RT-112,CyT49-endoderm,HFF-hTERT,HAP1 | HiChIP,HiC,Direct | 4DNFIQWD8ZYD,4DNFI8649RQJ,4DNFI3CFMRID,ENCSR662QKG,GSE95015,4DNFIWZEN3FF,ENCSR194SRI,GSE43070,GSE94872,4DNFIDJ2JZ7Q,4DNFIMROE6N4,4DNFIE8E4ANZ,ENCSR499RVD,4DNFIB7QTIMH,4DNFIBN9K4V9,4DNFI5SUHCGZ,ENCSR794RDS,GSE108787,GSE120294,4DNFIZ4F74QR,4DNFI7H4II2V,4DNFIW8TIFI5,ENCSR866FWQ,4DNFI6EIFUZI,4DNFIBM714BP,4DNFIA6NSSBJ,4DNFIF2D3TL9,4DNFI9VXTBE2,4DNFIREVU1Z5,4DNFIYD8LO9Z,4DNFIRKGMZRQ,GSE111537,4DNFIHN2QSMX,GSE155380,4DNFIV239W4L,4DNFICEGAHRC,4DNFIOUSETUP,4DNFIE8T8JZ8,4DNFI9YAVTI1,4DNFIBT4EAKN,GSE52457,4DNFIM2BMJ33,Direct,4DNFIXWCLD4M,4DNFIH9U4I7I,4DNFIAS8LV1C,4DNFISPUVQHA,4DNFI6JJQKFJ,4DNFIX7H3CE2,4DNFIYDBBSE3,GSE101921,4DNFIK61ILGM,4DNFIYIAUEPW,4DNFIEJEFCAM,ENCSR244BBG,GSE108869,GSE116872,ENCSR393LOP,4DNFIOCW5AEM,4DNFIPAF4PYT,4DNFIQVMVRP6,4DNFI7XAZNNQ,4DNFIVJ3IIQL,4DNFIFI6NIKJ,4DNFIFLJLIS5,4DNFINEQY95T,4DNFIDBIEXI7,4DNFIZGCA8AH,ENCSR094EIC,GSE105028,4DNFIBKZK63V,ENCSR507AHE,GSE58752,4DNFII84FBKM | SMC1,CTCF,Other,Rad21 | False | 0 | . | . | -0.026527 | 0.000564 | |
| CDBG00009782 | ENSG00000154640 | BTG3 | chr21:17593652-17612901 | - | protein_coding | True | chr21-16941592-16944786,chr21-16555905-16556068,chr21-16569553-16572421,chr21-15748731-15750124,chr21-17600958-17601160,chr21-16574890-16574992,chr21-16553024-16553429,chr21-17418323-17418617,chr21-16565213-16565671,chr21-17615995-17616481,chr21-17804509-17804871,chr21-17900339-17904921,chr21-17404236-17404703,chr21-15603827-15604974,chr21-17393972-17394584,chr21-17599493-17599842,chr21-17383874-17384847,chr21-16572677-16573040,chr21-17907747-17907969,chr21-15616932-15619309,chr21-17817153-17820909,chr21-17423187-17423402,chr21-17391038-17391864,chr21-17376067-17376842,chr21-16573328-16574192,chr21-17610934-17613664,chr21-17421921-17422186,chr21-15726005-15726347,chr21-16561687-16562411,chr21-17377529-17377890,chr21-16549809-16552371,chr21-15726744-15727018,chr21-16933256-16933897,chr21-15601722-15602750,chr21-17921425-17922537,chr21-17418933-17419226,chr21-17592922-17593114,chr21-15728664-15733925,chr21-16556680-16557811,chr21-17905247-17905528,chr21-17824544-17824781,chr21-15741172-15745156,chr21-15891358-15891425,chr21-17808054-17808570,chr21-15614967-15615288,chr21-17923497-17927046,chr21-15737261-15737766,chr21-15876479-15876649,chr21-16554422-16555230,chr21-17402988-17403462,chr21-17390128-17390618,chr21-15620844-15621426,chr21-15610467-15610826,chr21-17385065-17389738,chr21-17802147-17803028,chr21-17911083-17912506,chr21-17602938-17603192,chr21-17801315-17801609,chr21-17392847-17393210,chr21-15734927-15736334,chr21-16563033-16564655,chr21-15893413-15897253,chr21-15620069-15620305,chr21-15605222-15605521,chr21-15606019-15606774 | True | MCF-7,OCI-AML-3,GM12878,HCT-116,SARS-Cov2-olfactory,Hep-G2,MCF-10A,A-549,HCC1599,Motor-Neuron,HAP1,HFFc6,MSLCL,H9-hESC,Olfactory | HiChIP,HiC,Direct,ChIAPET | 4DNFIQWD8ZYD,ENCSR662QKG,GSE95015,ENCSR194SRI,4DNFIMROE6N4,GSE108787,ENCSR794RDS,4DNFI5SUHCGZ,ENCSR410MDC,4DNFIF2D3TL9,4DNFIYD8LO9Z,GSE111537,4DNFICSTCJQZ,ENCSR452NHL,4DNFI9YAVTI1,4DNFI3A3VYWU,Direct,4DNFIX7H3CE2,4DNFIV56OFE3,4DNFI6JJQKFJ,4DNFI1UEG1HD,GSE101921,GSE116872,4DNFIEJEFCAM,ENCSR393LOP,4DNFIOCW5AEM,4DNFI9ZWZ5BS,4DNFIFLJLIS5,ENCSR094EIC,GSE105028,4DNFII84FBKM | SMC1,CTCF,Other,Rad21 | True | 8 | SLK,OCI-AML-3,P3HR-1,MCF-10A,CMK,HAP1,U2OS | GSE140651,GSE111537,GSE154086,GSE138937,GSE126635,GSE89799 | CTCF,SMC1,Rad21,SA2 | 0.552320 | 0.000000 |
| CDBG00056265 | ENSG00000280594 | BTG3-AS1 | chr21:17611743-17633199 | + | lncRNA | False | . | True | HCT-116,GM12878,Hep-G2,MSLCL,HAP1,HFFc6 | HiC,Direct,ChIAPET | 4DNFI3A3VYWU,GSE95015,4DNFI9ZWZ5BS,ENCSR194SRI,Direct,4DNFIMROE6N4,4DNFIYD8LO9Z,4DNFIV56OFE3,4DNFI1UEG1HD,4DNFI5SUHCGZ,4DNFICSTCJQZ,ENCSR452NHL,ENCSR410MDC | Other,Rad21 | False | 0 | . | . | 0.441647 | 0.000000 | |
| CDBG00027058 | ENSG00000226956 | AP000432.1 | chr21:17659275-17660384 | - | lncRNA | False | . | True | MCF-7,HEK293T,IMR-90,K-562,MCF-10A,H1-hESC,HCC1599,HFF-hTERT,NaiveB,Aorta,HeLa-S3,H9-hESC,H1-Mesenchymal,H1-Mesendoderm | HiChIP,HiC,Direct | 4DNFI8649RQJ,4DNFI3CFMRID,4DNFIWZEN3FF,GSE43070,4DNFIDJ2JZ7Q,4DNFIE8E4ANZ,GSE108787,4DNFIB7QTIMH,4DNFIBN9K4V9,GSE84022,4DNFIPV5KFMK,4DNFIW8TIFI5,4DNFI7H4II2V,4DNFIBM714BP,4DNFIV239W4L,GSE52457,4DNFIM2BMJ33,Direct,4DNFIXWCLD4M,GSE101921,GSE116872,4DNFIZF1KI43,GSE44267,4DNFIPAF4PYT,4DNFIQVMVRP6,4DNFIVJ3IIQL,4DNFIFI6NIKJ,4DNFIDKJFK2S,GSE105028,4DNFIDBIEXI7,GSE58752 | Other,SMC1 | False | 0 | . | . | 0.040479 | 0.000000 | |
| CDBG00055602 | ENSG00000279648 | AP000432.2 | chr21:17705407-17707455 | + | TEC | False | . | True | H9-hESC,HeLa-S3 | HiC,Direct | 4DNFIBY3UHJB,4DNFIDZT7PR8,Direct | Other | False | 0 | . | . | 0.078240 | 0.000000 | |
| CDBG00035648 | ENSG00000240770 | C21orf91-OT1 | chr21:17763314-17792523 | - | lncRNA | False | . | True | MCF-7,HEK293T,GM12878,RT-112,K-562,H1-hESC,A-549,HFF-hTERT,NaiveB,HeLa-S3,H9-hESC,H1-Mesenchymal,HUES64 | HiChIP,HiC,Direct | GSE44267,4DNFI8649RQJ,GSE52457,4DNFIWZEN3FF,Direct,4DNFIDJ2JZ7Q,4DNFIFI6NIKJ,4DNFIXWCLD4M,GSE105028,GSE108787,4DNFIDBIEXI7,4DNFI1UEG1HD,GSE120294,GSE155380,GSE84022,ENCSR244BBG,GSE97394,4DNFIW8TIFI5,GSE80820,ENCSR410MDC | Rad21,Other,SMC1 | False | 0 | . | . | 0.050674 | 0.000000 | |
| CDBG00009783 | ENSG00000154642 | C21orf91 | chr21:17788973-17819356 | - | protein_coding | True | chr21-17783465-17785440,chr21-17579296-17579640,chr21-17668672-17669176,chr21-17352342-17352564,chr21-17434658-17435287,chr21-17907747-17907969,chr21-17786924-17787077,chr21-17795350-17796957,chr21-17788283-17788550,chr21-17683768-17683914,chr21-17923497-17927046,chr21-17392847-17393210,chr21-17694563-17695104,chr21-17688607-17690344,chr21-17660473-17661158,chr21-17574945-17575093,chr21-17599493-17599842,chr21-17602938-17603192,chr21-17600958-17601160,chr21-17900339-17904921,chr21-17371078-17371857,chr21-17433211-17433485,chr21-17368762-17369199,chr21-17788766-17789298,chr21-17921425-17922537,chr21-17615995-17616481,chr21-17673220-17674924,chr21-17584154-17587049,chr21-17391038-17391864,chr21-17808054-17808570,chr21-17393972-17394584,chr21-17693819-17694295,chr21-17385065-17389738,chr21-17793333-17794084,chr21-17383874-17384847,chr21-17801315-17801609,chr21-17440398-17441901,chr21-17786174-17786402,chr21-17436920-17439074,chr21-16597851-16598314,chr21-17376067-17376842,chr21-17581951-17582360,chr21-17691367-17691688,chr21-17390128-17390618,chr21-17685520-17685630,chr21-16586117-16589435,chr21-17817153-17820909,chr21-17610934-17613664,chr21-17575466-17576102,chr21-17360708-17361293,chr21-17802147-17803028,chr21-17911083-17912506,chr21-16583550-16584570,chr21-16584776-16585081,chr21-17905247-17905528,chr21-17804509-17804871,chr21-17364021-17364262,chr21-17370093-17370608,chr21-16575404-16575871,chr21-18109406-18109638,chr21-17443841-17444029,chr21-18877363-18878254,chr21-17592922-17593114,chr21-17650364-17650607,chr21-18116584-18116748,chr21-17429707-17430271,chr21-17797580-17797996,chr21-17447844-17448535,chr21-17427928-17429100,chr21-17377529-17377890,chr21-17352941-17353720,chr21-17444297-17444731,chr21-17661485-17661799,chr21-18875172-18876057,chr21-16579540-16580303,chr21-18885261-18885334,chr21-17442241-17442520,chr21-17662469-17662816,chr21-16595785-16596040,chr21-17676688-17681173,chr21-16592201-16592905,chr21-17789693-17790527 | True | TAMR-MCF7,MB157,hTERT-HME1,H1-Mesenchymal,Olfactory,MCF-7,HEK293T,GM12878,K-562,A-549,HFFc6,HeLa-S3,H9-hESC,HCT-116,H1-hESC,HT-1376,Motor-Neuron,NaiveB,HUES64,SU-DHL-4,RT-112,Skin-Fibroblast,CC-2551,HFF-hTERT,HAP1 | HiChIP,HiC,Direct,ChIAPET | 4DNFI8649RQJ,ENCSR662QKG,GSE95015,4DNFIWZEN3FF,GSE118716,GSE108787,4DNFI5SUHCGZ,GSE84022,GSE120294,4DNFIZ4F74QR,4DNFIW8TIFI5,ENCSR410MDC,4DNFIMEG1QIC,ENCSR866FWQ,ENCSR732QOH,4DNFIYD8LO9Z,GSE155380,GSE97394,GSE80820,4DNFI9YAVTI1,GSE52457,ENCSR658RQQ,Direct,4DNFIXWCLD4M,4DNFIX7H3CE2,4DNFIV56OFE3,4DNFI1UEG1HD,ENCSR244BBG,ENCSR393LOP,GSE44267,ENCSR991JXX,4DNFIOCW5AEM,4DNFI9ZWZ5BS,4DNFIFI6NIKJ,ENCSR933UZH,GSE105028,4DNFIDBIEXI7,4DNFIZGCA8AH,GSE116869 | SMC1,CTCF,Other,Rad21 | True | 10 | HL-60,SLK,P3HR-1,CMK,HAP1,U2OS,HeLa-S3,Keratinocytes | GSE83870,GSE140651,GSE131581,GSE154086,GSE138937,GSE126635,GSE89799,GSE130558 | SA2,WAPL,CTCF,SMC1,Rad21 | 0.593803 | 0.000000 |
| CDBG00037259 | ENSG00000244676 | AL109761.1 | chr21:17793487-17810845 | + | lncRNA | False | . | True | TAMR-MCF7,MB157,H1-Mesenchymal,Olfactory,MCF-7,HEK293T,GM12878,K-562,A-549,HFFc6,HeLa-S3,H9-hESC,HCT-116,H1-hESC,Motor-Neuron,NaiveB,HUES64,RT-112,CC-2551,HFF-hTERT,HAP1 | HiChIP,HiC,Direct | 4DNFI8649RQJ,ENCSR662QKG,GSE95015,4DNFIWZEN3FF,GSE118716,GSE108787,4DNFI5SUHCGZ,GSE84022,GSE120294,4DNFIZ4F74QR,4DNFIW8TIFI5,ENCSR410MDC,4DNFIMEG1QIC,ENCSR866FWQ,4DNFIYD8LO9Z,GSE155380,GSE97394,GSE80820,4DNFI9YAVTI1,GSE52457,Direct,4DNFIXWCLD4M,4DNFIX7H3CE2,4DNFIV56OFE3,4DNFI1UEG1HD,ENCSR244BBG,ENCSR393LOP,GSE44267,4DNFIOCW5AEM,4DNFI9ZWZ5BS,4DNFIFI6NIKJ,GSE105028,4DNFIDBIEXI7,4DNFIZGCA8AH,GSE116869 | SMC1,CTCF,Other,Rad21 | False | 0 | . | . | 0.243265 | 0.000000 | |
| CDBG00030295 | ENSG00000231755 | CHODL-AS1 | chr21:17835015-17885608 | - | lncRNA | False | . | True | IMR-90,H1-hESC,A-549,HFF-hTERT,HUVEC | HiC,Direct | 4DNFIE8T8JZ8,ENCSR393LOP,4DNFI8649RQJ,ENCSR662QKG,4DNFI6XD6JAQ,Direct,GSE94872,ENCSR499RVD,ENCSR852KQC,4DNFIH7TH4MF,ENCSR244BBG | Other | False | 0 | . | . | 0.046685 | 0.000000 | |
| CDBG00023113 | ENSG00000215369 | RPL37P3 | chr21:17894192-17894485 | - | processed_pseudogene | False | . | True | A-549,HUVEC | HiC | ENCSR393LOP,ENCSR662QKG,GSE94872,ENCSR499RVD,ENCSR244BBG | Other | False | 0 | . | . | 0.034985 | 0.000005 |